Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21412 | 64459;64460;64461 | chr2:178586667;178586666;178586665 | chr2:179451394;179451393;179451392 |
N2AB | 19771 | 59536;59537;59538 | chr2:178586667;178586666;178586665 | chr2:179451394;179451393;179451392 |
N2A | 18844 | 56755;56756;56757 | chr2:178586667;178586666;178586665 | chr2:179451394;179451393;179451392 |
N2B | 12347 | 37264;37265;37266 | chr2:178586667;178586666;178586665 | chr2:179451394;179451393;179451392 |
Novex-1 | 12472 | 37639;37640;37641 | chr2:178586667;178586666;178586665 | chr2:179451394;179451393;179451392 |
Novex-2 | 12539 | 37840;37841;37842 | chr2:178586667;178586666;178586665 | chr2:179451394;179451393;179451392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.625 | N | 0.494 | 0.233 | 0.18274738541 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4806 | ambiguous | 0.4391 | ambiguous | -0.683 | Destabilizing | 0.998 | D | 0.494 | neutral | None | None | None | None | N |
A/D | 0.1774 | likely_benign | 0.1595 | benign | -0.789 | Destabilizing | 0.728 | D | 0.389 | neutral | None | None | None | None | N |
A/E | 0.1655 | likely_benign | 0.1524 | benign | -0.899 | Destabilizing | 0.005 | N | 0.259 | neutral | N | 0.360498442 | None | None | N |
A/F | 0.3455 | ambiguous | 0.3214 | benign | -0.89 | Destabilizing | 0.991 | D | 0.499 | neutral | None | None | None | None | N |
A/G | 0.1203 | likely_benign | 0.1166 | benign | -0.55 | Destabilizing | 0.012 | N | 0.216 | neutral | N | 0.389455912 | None | None | N |
A/H | 0.3913 | ambiguous | 0.3564 | ambiguous | -0.501 | Destabilizing | 0.993 | D | 0.497 | neutral | None | None | None | None | N |
A/I | 0.1652 | likely_benign | 0.162 | benign | -0.339 | Destabilizing | 0.974 | D | 0.443 | neutral | None | None | None | None | N |
A/K | 0.3402 | ambiguous | 0.2847 | benign | -0.82 | Destabilizing | 0.728 | D | 0.366 | neutral | None | None | None | None | N |
A/L | 0.1292 | likely_benign | 0.1272 | benign | -0.339 | Destabilizing | 0.842 | D | 0.389 | neutral | None | None | None | None | N |
A/M | 0.173 | likely_benign | 0.1768 | benign | -0.464 | Destabilizing | 0.998 | D | 0.475 | neutral | None | None | None | None | N |
A/N | 0.1719 | likely_benign | 0.1618 | benign | -0.491 | Destabilizing | 0.949 | D | 0.421 | neutral | None | None | None | None | N |
A/P | 0.0999 | likely_benign | 0.0991 | benign | -0.339 | Destabilizing | 0.966 | D | 0.415 | neutral | N | 0.412834204 | None | None | N |
A/Q | 0.243 | likely_benign | 0.2288 | benign | -0.734 | Destabilizing | 0.904 | D | 0.406 | neutral | None | None | None | None | N |
A/R | 0.3938 | ambiguous | 0.3341 | benign | -0.328 | Destabilizing | 0.949 | D | 0.415 | neutral | None | None | None | None | N |
A/S | 0.0849 | likely_benign | 0.0837 | benign | -0.678 | Destabilizing | 0.625 | D | 0.494 | neutral | N | 0.381316431 | None | None | N |
A/T | 0.0779 | likely_benign | 0.0773 | benign | -0.707 | Destabilizing | 0.801 | D | 0.443 | neutral | N | 0.403155928 | None | None | N |
A/V | 0.0943 | likely_benign | 0.093 | benign | -0.339 | Destabilizing | 0.891 | D | 0.445 | neutral | N | 0.443175754 | None | None | N |
A/W | 0.6795 | likely_pathogenic | 0.6295 | pathogenic | -1.083 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
A/Y | 0.466 | ambiguous | 0.4165 | ambiguous | -0.725 | Destabilizing | 0.991 | D | 0.5 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.