Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21417 | 64474;64475;64476 | chr2:178586652;178586651;178586650 | chr2:179451379;179451378;179451377 |
N2AB | 19776 | 59551;59552;59553 | chr2:178586652;178586651;178586650 | chr2:179451379;179451378;179451377 |
N2A | 18849 | 56770;56771;56772 | chr2:178586652;178586651;178586650 | chr2:179451379;179451378;179451377 |
N2B | 12352 | 37279;37280;37281 | chr2:178586652;178586651;178586650 | chr2:179451379;179451378;179451377 |
Novex-1 | 12477 | 37654;37655;37656 | chr2:178586652;178586651;178586650 | chr2:179451379;179451378;179451377 |
Novex-2 | 12544 | 37855;37856;37857 | chr2:178586652;178586651;178586650 | chr2:179451379;179451378;179451377 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs879230654 | None | 0.625 | N | 0.471 | 0.161 | 0.26547132957 | gnomAD-4.0.0 | 1.36892E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7995E-06 | 0 | 0 |
E/Q | None | None | 0.051 | N | 0.215 | 0.135 | 0.177238962908 | gnomAD-4.0.0 | 6.84448E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15955E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1733 | likely_benign | 0.1604 | benign | -0.641 | Destabilizing | 0.454 | N | 0.511 | neutral | N | 0.477368472 | None | None | I |
E/C | 0.8665 | likely_pathogenic | 0.8459 | pathogenic | 0.018 | Stabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | I |
E/D | 0.1684 | likely_benign | 0.1593 | benign | -0.335 | Destabilizing | 0.625 | D | 0.471 | neutral | N | 0.476733754 | None | None | I |
E/F | 0.8451 | likely_pathogenic | 0.8196 | pathogenic | -0.534 | Destabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | I |
E/G | 0.3154 | likely_benign | 0.2831 | benign | -0.832 | Destabilizing | 0.801 | D | 0.515 | neutral | N | 0.507691379 | None | None | I |
E/H | 0.57 | likely_pathogenic | 0.5127 | ambiguous | -0.451 | Destabilizing | 0.974 | D | 0.535 | neutral | None | None | None | None | I |
E/I | 0.3728 | ambiguous | 0.3665 | ambiguous | -0.166 | Destabilizing | 0.974 | D | 0.547 | neutral | None | None | None | None | I |
E/K | 0.2835 | likely_benign | 0.2449 | benign | 0.38 | Stabilizing | 0.454 | N | 0.473 | neutral | N | 0.42170719 | None | None | I |
E/L | 0.4561 | ambiguous | 0.4266 | ambiguous | -0.166 | Destabilizing | 0.842 | D | 0.537 | neutral | None | None | None | None | I |
E/M | 0.5249 | ambiguous | 0.5181 | ambiguous | 0.124 | Stabilizing | 0.974 | D | 0.537 | neutral | None | None | None | None | I |
E/N | 0.3029 | likely_benign | 0.2766 | benign | -0.006 | Destabilizing | 0.842 | D | 0.468 | neutral | None | None | None | None | I |
E/P | 0.3345 | likely_benign | 0.277 | benign | -0.306 | Destabilizing | 0.007 | N | 0.267 | neutral | None | None | None | None | I |
E/Q | 0.1641 | likely_benign | 0.152 | benign | 0.026 | Stabilizing | 0.051 | N | 0.215 | neutral | N | 0.477829832 | None | None | I |
E/R | 0.4036 | ambiguous | 0.3565 | ambiguous | 0.452 | Stabilizing | 0.728 | D | 0.477 | neutral | None | None | None | None | I |
E/S | 0.2304 | likely_benign | 0.2111 | benign | -0.142 | Destabilizing | 0.172 | N | 0.227 | neutral | None | None | None | None | I |
E/T | 0.2086 | likely_benign | 0.2066 | benign | 0.027 | Stabilizing | 0.728 | D | 0.494 | neutral | None | None | None | None | I |
E/V | 0.213 | likely_benign | 0.2111 | benign | -0.306 | Destabilizing | 0.891 | D | 0.529 | neutral | N | 0.462745736 | None | None | I |
E/W | 0.9438 | likely_pathogenic | 0.9273 | pathogenic | -0.335 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | I |
E/Y | 0.729 | likely_pathogenic | 0.6769 | pathogenic | -0.278 | Destabilizing | 0.991 | D | 0.55 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.