Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2142 | 6649;6650;6651 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
N2AB | 2142 | 6649;6650;6651 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
N2A | 2142 | 6649;6650;6651 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
N2B | 2096 | 6511;6512;6513 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
Novex-1 | 2096 | 6511;6512;6513 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
Novex-2 | 2096 | 6511;6512;6513 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
Novex-3 | 2142 | 6649;6650;6651 | chr2:178775440;178775439;178775438 | chr2:179640167;179640166;179640165 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.946 | N | 0.418 | 0.14 | 0.288727942641 | gnomAD-4.0.0 | 6.84114E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99306E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0913 | likely_benign | 0.1 | benign | -0.66 | Destabilizing | 0.64 | D | 0.44 | neutral | N | 0.510680428 | None | None | N |
T/C | 0.3682 | ambiguous | 0.4223 | ambiguous | -0.449 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
T/D | 0.3176 | likely_benign | 0.3689 | ambiguous | -0.877 | Destabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | N |
T/E | 0.2901 | likely_benign | 0.3102 | benign | -0.902 | Destabilizing | 0.988 | D | 0.499 | neutral | None | None | None | None | N |
T/F | 0.2448 | likely_benign | 0.3053 | benign | -0.98 | Destabilizing | 0.976 | D | 0.655 | neutral | None | None | None | None | N |
T/G | 0.1771 | likely_benign | 0.195 | benign | -0.873 | Destabilizing | 0.988 | D | 0.559 | neutral | None | None | None | None | N |
T/H | 0.2388 | likely_benign | 0.2731 | benign | -1.271 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
T/I | 0.2338 | likely_benign | 0.2817 | benign | -0.191 | Destabilizing | 0.103 | N | 0.239 | neutral | N | 0.514136682 | None | None | N |
T/K | 0.1867 | likely_benign | 0.1906 | benign | -0.687 | Destabilizing | 0.988 | D | 0.497 | neutral | None | None | None | None | N |
T/L | 0.0957 | likely_benign | 0.1094 | benign | -0.191 | Destabilizing | 0.034 | N | 0.198 | neutral | None | None | None | None | N |
T/M | 0.0941 | likely_benign | 0.1011 | benign | 0.309 | Stabilizing | 0.976 | D | 0.554 | neutral | None | None | None | None | N |
T/N | 0.1098 | likely_benign | 0.1257 | benign | -0.705 | Destabilizing | 0.995 | D | 0.507 | neutral | N | 0.501546609 | None | None | N |
T/P | 0.5415 | ambiguous | 0.5995 | pathogenic | -0.317 | Destabilizing | 0.995 | D | 0.547 | neutral | D | 0.650498563 | None | None | N |
T/Q | 0.1943 | likely_benign | 0.2021 | benign | -1.015 | Destabilizing | 0.996 | D | 0.55 | neutral | None | None | None | None | N |
T/R | 0.1852 | likely_benign | 0.1935 | benign | -0.339 | Destabilizing | 0.996 | D | 0.549 | neutral | None | None | None | None | N |
T/S | 0.0836 | likely_benign | 0.0919 | benign | -0.859 | Destabilizing | 0.946 | D | 0.418 | neutral | N | 0.503463507 | None | None | N |
T/V | 0.161 | likely_benign | 0.1891 | benign | -0.317 | Destabilizing | 0.034 | N | 0.168 | neutral | None | None | None | None | N |
T/W | 0.6316 | likely_pathogenic | 0.7053 | pathogenic | -0.947 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/Y | 0.3229 | likely_benign | 0.3953 | ambiguous | -0.664 | Destabilizing | 0.996 | D | 0.648 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.