Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21422 | 64489;64490;64491 | chr2:178586637;178586636;178586635 | chr2:179451364;179451363;179451362 |
N2AB | 19781 | 59566;59567;59568 | chr2:178586637;178586636;178586635 | chr2:179451364;179451363;179451362 |
N2A | 18854 | 56785;56786;56787 | chr2:178586637;178586636;178586635 | chr2:179451364;179451363;179451362 |
N2B | 12357 | 37294;37295;37296 | chr2:178586637;178586636;178586635 | chr2:179451364;179451363;179451362 |
Novex-1 | 12482 | 37669;37670;37671 | chr2:178586637;178586636;178586635 | chr2:179451364;179451363;179451362 |
Novex-2 | 12549 | 37870;37871;37872 | chr2:178586637;178586636;178586635 | chr2:179451364;179451363;179451362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs758963173 | None | 1.0 | N | 0.782 | 0.259 | 0.258779203287 | gnomAD-4.0.0 | 4.10669E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39842E-06 | 0 | 0 |
K/R | None | None | 0.999 | N | 0.631 | 0.303 | 0.410071178582 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.767 | likely_pathogenic | 0.6922 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/C | 0.9259 | likely_pathogenic | 0.9062 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
K/D | 0.8373 | likely_pathogenic | 0.7797 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/E | 0.5578 | ambiguous | 0.4567 | ambiguous | 0.105 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.475786817 | None | None | N |
K/F | 0.981 | likely_pathogenic | 0.9708 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/G | 0.7301 | likely_pathogenic | 0.6783 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
K/H | 0.6055 | likely_pathogenic | 0.5545 | ambiguous | -0.466 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/I | 0.9226 | likely_pathogenic | 0.8846 | pathogenic | 0.52 | Stabilizing | 1.0 | D | 0.753 | deleterious | N | 0.483107165 | None | None | N |
K/L | 0.8427 | likely_pathogenic | 0.7909 | pathogenic | 0.52 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
K/M | 0.757 | likely_pathogenic | 0.673 | pathogenic | 0.148 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/N | 0.7647 | likely_pathogenic | 0.7029 | pathogenic | 0.035 | Stabilizing | 1.0 | D | 0.782 | deleterious | N | 0.477941688 | None | None | N |
K/P | 0.7648 | likely_pathogenic | 0.695 | pathogenic | 0.363 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/Q | 0.3662 | ambiguous | 0.3109 | benign | -0.07 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.510939541 | None | None | N |
K/R | 0.1071 | likely_benign | 0.1046 | benign | -0.145 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.478536334 | None | None | N |
K/S | 0.756 | likely_pathogenic | 0.6934 | pathogenic | -0.45 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/T | 0.548 | ambiguous | 0.4704 | ambiguous | -0.252 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.485697167 | None | None | N |
K/V | 0.8733 | likely_pathogenic | 0.8252 | pathogenic | 0.363 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/W | 0.9415 | likely_pathogenic | 0.9202 | pathogenic | -0.108 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/Y | 0.9338 | likely_pathogenic | 0.9102 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.