Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21428 | 64507;64508;64509 | chr2:178586619;178586618;178586617 | chr2:179451346;179451345;179451344 |
N2AB | 19787 | 59584;59585;59586 | chr2:178586619;178586618;178586617 | chr2:179451346;179451345;179451344 |
N2A | 18860 | 56803;56804;56805 | chr2:178586619;178586618;178586617 | chr2:179451346;179451345;179451344 |
N2B | 12363 | 37312;37313;37314 | chr2:178586619;178586618;178586617 | chr2:179451346;179451345;179451344 |
Novex-1 | 12488 | 37687;37688;37689 | chr2:178586619;178586618;178586617 | chr2:179451346;179451345;179451344 |
Novex-2 | 12555 | 37888;37889;37890 | chr2:178586619;178586618;178586617 | chr2:179451346;179451345;179451344 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1576014979 | None | 0.958 | N | 0.641 | 0.374 | 0.6554178980150001 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs1576014979 | None | 0.958 | N | 0.641 | 0.374 | 0.6554178980150001 | gnomAD-4.0.0 | 2.56421E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39501E-06 | 0 | 2.84657E-05 |
V/F | None | None | 0.988 | N | 0.791 | 0.366 | 0.715876910944 | gnomAD-4.0.0 | 1.59263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86089E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7751 | likely_pathogenic | 0.731 | pathogenic | -1.241 | Destabilizing | 0.958 | D | 0.641 | neutral | N | 0.479809618 | None | None | N |
V/C | 0.949 | likely_pathogenic | 0.9365 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/D | 0.9946 | likely_pathogenic | 0.9913 | pathogenic | -1.403 | Destabilizing | 0.998 | D | 0.808 | deleterious | N | 0.495445111 | None | None | N |
V/E | 0.9806 | likely_pathogenic | 0.9697 | pathogenic | -1.122 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
V/F | 0.6492 | likely_pathogenic | 0.568 | pathogenic | -0.667 | Destabilizing | 0.988 | D | 0.791 | deleterious | N | 0.50129078 | None | None | N |
V/G | 0.9229 | likely_pathogenic | 0.9009 | pathogenic | -1.811 | Destabilizing | 0.994 | D | 0.809 | deleterious | D | 0.525666139 | None | None | N |
V/H | 0.9901 | likely_pathogenic | 0.9848 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/I | 0.0865 | likely_benign | 0.0857 | benign | 0.367 | Stabilizing | 0.067 | N | 0.259 | neutral | N | 0.458819997 | None | None | N |
V/K | 0.9772 | likely_pathogenic | 0.9632 | pathogenic | -0.726 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
V/L | 0.4503 | ambiguous | 0.4107 | ambiguous | 0.367 | Stabilizing | 0.618 | D | 0.638 | neutral | N | 0.505722935 | None | None | N |
V/M | 0.5484 | ambiguous | 0.4908 | ambiguous | 0.105 | Stabilizing | 0.991 | D | 0.767 | deleterious | None | None | None | None | N |
V/N | 0.9823 | likely_pathogenic | 0.9742 | pathogenic | -1.215 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
V/P | 0.9847 | likely_pathogenic | 0.9824 | pathogenic | -0.143 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
V/Q | 0.9726 | likely_pathogenic | 0.9596 | pathogenic | -0.847 | Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | N |
V/R | 0.9677 | likely_pathogenic | 0.9497 | pathogenic | -1.081 | Destabilizing | 0.998 | D | 0.858 | deleterious | None | None | None | None | N |
V/S | 0.9522 | likely_pathogenic | 0.9345 | pathogenic | -1.863 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
V/T | 0.8889 | likely_pathogenic | 0.8673 | pathogenic | -1.399 | Destabilizing | 0.968 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/W | 0.9911 | likely_pathogenic | 0.9867 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9644 | likely_pathogenic | 0.9446 | pathogenic | -0.658 | Destabilizing | 0.995 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.