Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2144 | 6655;6656;6657 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
N2AB | 2144 | 6655;6656;6657 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
N2A | 2144 | 6655;6656;6657 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
N2B | 2098 | 6517;6518;6519 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
Novex-1 | 2098 | 6517;6518;6519 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
Novex-2 | 2098 | 6517;6518;6519 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
Novex-3 | 2144 | 6655;6656;6657 | chr2:178775434;178775433;178775432 | chr2:179640161;179640160;179640159 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs747447866 | 0.962 | 0.334 | D | 0.561 | 0.288 | 0.32580497728 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs747447866 | 0.962 | 0.334 | D | 0.561 | 0.288 | 0.32580497728 | gnomAD-4.0.0 | 1.59074E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1447 | likely_benign | 0.1472 | benign | -0.037 | Destabilizing | 0.334 | N | 0.604 | neutral | N | 0.507166245 | None | None | N |
E/C | 0.9085 | likely_pathogenic | 0.9177 | pathogenic | 0.179 | Stabilizing | 0.982 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.0865 | likely_benign | 0.0871 | benign | -0.135 | Destabilizing | 0.001 | N | 0.176 | neutral | N | 0.507638781 | None | None | N |
E/F | 0.7994 | likely_pathogenic | 0.8338 | pathogenic | -0.176 | Destabilizing | 0.982 | D | 0.749 | deleterious | None | None | None | None | N |
E/G | 0.202 | likely_benign | 0.2023 | benign | -0.15 | Destabilizing | 0.334 | N | 0.567 | neutral | N | 0.511614229 | None | None | N |
E/H | 0.6001 | likely_pathogenic | 0.607 | pathogenic | 0.226 | Stabilizing | 0.947 | D | 0.669 | neutral | None | None | None | None | N |
E/I | 0.4631 | ambiguous | 0.4849 | ambiguous | 0.199 | Stabilizing | 0.826 | D | 0.772 | deleterious | None | None | None | None | N |
E/K | 0.267 | likely_benign | 0.2535 | benign | 0.614 | Stabilizing | 0.334 | N | 0.561 | neutral | D | 0.549173317 | None | None | N |
E/L | 0.4541 | ambiguous | 0.4848 | ambiguous | 0.199 | Stabilizing | 0.7 | D | 0.761 | deleterious | None | None | None | None | N |
E/M | 0.5414 | ambiguous | 0.5536 | ambiguous | 0.204 | Stabilizing | 0.982 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/N | 0.2338 | likely_benign | 0.2397 | benign | 0.472 | Stabilizing | 0.539 | D | 0.657 | neutral | None | None | None | None | N |
E/P | 0.7543 | likely_pathogenic | 0.8065 | pathogenic | 0.138 | Stabilizing | 0.826 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Q | 0.2141 | likely_benign | 0.2047 | benign | 0.47 | Stabilizing | 0.638 | D | 0.638 | neutral | N | 0.513788776 | None | None | N |
E/R | 0.4336 | ambiguous | 0.4357 | ambiguous | 0.693 | Stabilizing | 0.7 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.1752 | likely_benign | 0.1794 | benign | 0.317 | Stabilizing | 0.25 | N | 0.571 | neutral | None | None | None | None | N |
E/T | 0.2465 | likely_benign | 0.251 | benign | 0.414 | Stabilizing | 0.7 | D | 0.659 | neutral | None | None | None | None | N |
E/V | 0.2885 | likely_benign | 0.3031 | benign | 0.138 | Stabilizing | 0.781 | D | 0.726 | prob.delet. | D | 0.633217716 | None | None | N |
E/W | 0.9378 | likely_pathogenic | 0.9471 | pathogenic | -0.153 | Destabilizing | 0.982 | D | 0.793 | deleterious | None | None | None | None | N |
E/Y | 0.7211 | likely_pathogenic | 0.7478 | pathogenic | 0.046 | Stabilizing | 0.982 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.