Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21447 | 64564;64565;64566 | chr2:178586562;178586561;178586560 | chr2:179451289;179451288;179451287 |
N2AB | 19806 | 59641;59642;59643 | chr2:178586562;178586561;178586560 | chr2:179451289;179451288;179451287 |
N2A | 18879 | 56860;56861;56862 | chr2:178586562;178586561;178586560 | chr2:179451289;179451288;179451287 |
N2B | 12382 | 37369;37370;37371 | chr2:178586562;178586561;178586560 | chr2:179451289;179451288;179451287 |
Novex-1 | 12507 | 37744;37745;37746 | chr2:178586562;178586561;178586560 | chr2:179451289;179451288;179451287 |
Novex-2 | 12574 | 37945;37946;37947 | chr2:178586562;178586561;178586560 | chr2:179451289;179451288;179451287 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2049030119 | None | 0.992 | N | 0.482 | 0.339 | 0.480574121323 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs2049030119 | None | 0.992 | N | 0.482 | 0.339 | 0.480574121323 | gnomAD-4.0.0 | 3.09964E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1644 | likely_benign | 0.127 | benign | -0.287 | Destabilizing | 0.992 | D | 0.482 | neutral | N | 0.408388389 | None | None | I |
V/C | 0.7668 | likely_pathogenic | 0.7082 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
V/D | 0.8529 | likely_pathogenic | 0.7251 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.503434778 | None | None | I |
V/E | 0.7047 | likely_pathogenic | 0.5753 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
V/F | 0.2965 | likely_benign | 0.2123 | benign | -0.646 | Destabilizing | 0.999 | D | 0.751 | deleterious | N | 0.487486678 | None | None | I |
V/G | 0.4259 | ambiguous | 0.322 | benign | -0.372 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.483982226 | None | None | I |
V/H | 0.7962 | likely_pathogenic | 0.677 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
V/I | 0.1025 | likely_benign | 0.092 | benign | -0.222 | Destabilizing | 0.619 | D | 0.327 | neutral | N | 0.417760021 | None | None | I |
V/K | 0.7017 | likely_pathogenic | 0.5482 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
V/L | 0.3979 | ambiguous | 0.2787 | benign | -0.222 | Destabilizing | 0.962 | D | 0.521 | neutral | N | 0.472421225 | None | None | I |
V/M | 0.2454 | likely_benign | 0.1947 | benign | -0.315 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
V/N | 0.6081 | likely_pathogenic | 0.4546 | ambiguous | -0.037 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
V/P | 0.8951 | likely_pathogenic | 0.8675 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
V/Q | 0.5865 | likely_pathogenic | 0.4588 | ambiguous | -0.31 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
V/R | 0.5893 | likely_pathogenic | 0.4302 | ambiguous | 0.264 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
V/S | 0.3318 | likely_benign | 0.2354 | benign | -0.361 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
V/T | 0.2551 | likely_benign | 0.1856 | benign | -0.397 | Destabilizing | 0.997 | D | 0.71 | prob.delet. | None | None | None | None | I |
V/W | 0.9208 | likely_pathogenic | 0.8575 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
V/Y | 0.7736 | likely_pathogenic | 0.6381 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.