Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21450 | 64573;64574;64575 | chr2:178586553;178586552;178586551 | chr2:179451280;179451279;179451278 |
N2AB | 19809 | 59650;59651;59652 | chr2:178586553;178586552;178586551 | chr2:179451280;179451279;179451278 |
N2A | 18882 | 56869;56870;56871 | chr2:178586553;178586552;178586551 | chr2:179451280;179451279;179451278 |
N2B | 12385 | 37378;37379;37380 | chr2:178586553;178586552;178586551 | chr2:179451280;179451279;179451278 |
Novex-1 | 12510 | 37753;37754;37755 | chr2:178586553;178586552;178586551 | chr2:179451280;179451279;179451278 |
Novex-2 | 12577 | 37954;37955;37956 | chr2:178586553;178586552;178586551 | chr2:179451280;179451279;179451278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.991 | N | 0.759 | 0.459 | 0.371718192555 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
S/T | None | None | 0.969 | D | 0.711 | 0.396 | 0.335910606209 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.6347 | likely_pathogenic | 0.611 | pathogenic | -0.707 | Destabilizing | 0.807 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/C | 0.869 | likely_pathogenic | 0.8392 | pathogenic | -0.66 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.520645575 | None | None | N |
S/D | 0.9937 | likely_pathogenic | 0.9915 | pathogenic | -1.155 | Destabilizing | 0.976 | D | 0.745 | deleterious | None | None | None | None | N |
S/E | 0.9978 | likely_pathogenic | 0.9971 | pathogenic | -1.075 | Destabilizing | 0.976 | D | 0.757 | deleterious | None | None | None | None | N |
S/F | 0.9973 | likely_pathogenic | 0.9962 | pathogenic | -0.549 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
S/G | 0.137 | likely_benign | 0.1466 | benign | -1.032 | Destabilizing | 0.02 | N | 0.46 | neutral | N | 0.432600895 | None | None | N |
S/H | 0.9945 | likely_pathogenic | 0.9927 | pathogenic | -1.484 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
S/I | 0.9972 | likely_pathogenic | 0.9957 | pathogenic | 0.077 | Stabilizing | 0.997 | D | 0.768 | deleterious | N | 0.520392085 | None | None | N |
S/K | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -0.887 | Destabilizing | 0.976 | D | 0.757 | deleterious | None | None | None | None | N |
S/L | 0.9876 | likely_pathogenic | 0.9837 | pathogenic | 0.077 | Stabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
S/M | 0.9933 | likely_pathogenic | 0.9912 | pathogenic | 0.164 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/N | 0.9806 | likely_pathogenic | 0.9755 | pathogenic | -1.134 | Destabilizing | 0.939 | D | 0.727 | prob.delet. | D | 0.531152506 | None | None | N |
S/P | 0.9967 | likely_pathogenic | 0.9958 | pathogenic | -0.149 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
S/Q | 0.9965 | likely_pathogenic | 0.9956 | pathogenic | -1.13 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
S/R | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -0.922 | Destabilizing | 0.991 | D | 0.759 | deleterious | N | 0.519885106 | None | None | N |
S/T | 0.905 | likely_pathogenic | 0.8817 | pathogenic | -0.942 | Destabilizing | 0.969 | D | 0.711 | prob.delet. | D | 0.530138548 | None | None | N |
S/V | 0.9959 | likely_pathogenic | 0.9941 | pathogenic | -0.149 | Destabilizing | 0.993 | D | 0.768 | deleterious | None | None | None | None | N |
S/W | 0.9979 | likely_pathogenic | 0.997 | pathogenic | -0.684 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
S/Y | 0.9957 | likely_pathogenic | 0.994 | pathogenic | -0.359 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.