Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21456 | 64591;64592;64593 | chr2:178586535;178586534;178586533 | chr2:179451262;179451261;179451260 |
N2AB | 19815 | 59668;59669;59670 | chr2:178586535;178586534;178586533 | chr2:179451262;179451261;179451260 |
N2A | 18888 | 56887;56888;56889 | chr2:178586535;178586534;178586533 | chr2:179451262;179451261;179451260 |
N2B | 12391 | 37396;37397;37398 | chr2:178586535;178586534;178586533 | chr2:179451262;179451261;179451260 |
Novex-1 | 12516 | 37771;37772;37773 | chr2:178586535;178586534;178586533 | chr2:179451262;179451261;179451260 |
Novex-2 | 12583 | 37972;37973;37974 | chr2:178586535;178586534;178586533 | chr2:179451262;179451261;179451260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1432709459 | None | 0.457 | N | 0.521 | 0.183 | 0.250039746154 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2048 | likely_benign | 0.1468 | benign | 0.036 | Stabilizing | 0.297 | N | 0.535 | neutral | N | 0.451438238 | None | None | I |
E/C | 0.9216 | likely_pathogenic | 0.8575 | pathogenic | -0.236 | Destabilizing | 0.989 | D | 0.787 | deleterious | None | None | None | None | I |
E/D | 0.132 | likely_benign | 0.1041 | benign | -0.331 | Destabilizing | 0.003 | N | 0.218 | neutral | N | 0.473064304 | None | None | I |
E/F | 0.8843 | likely_pathogenic | 0.798 | pathogenic | -0.041 | Destabilizing | 0.888 | D | 0.769 | deleterious | None | None | None | None | I |
E/G | 0.2665 | likely_benign | 0.191 | benign | -0.057 | Destabilizing | 0.457 | N | 0.491 | neutral | N | 0.480030349 | None | None | I |
E/H | 0.6783 | likely_pathogenic | 0.5192 | ambiguous | 0.606 | Stabilizing | 0.989 | D | 0.577 | neutral | None | None | None | None | I |
E/I | 0.5685 | likely_pathogenic | 0.425 | ambiguous | 0.22 | Stabilizing | 0.797 | D | 0.784 | deleterious | None | None | None | None | I |
E/K | 0.3262 | likely_benign | 0.2087 | benign | 0.38 | Stabilizing | 0.457 | N | 0.521 | neutral | N | 0.486454889 | None | None | I |
E/L | 0.5951 | likely_pathogenic | 0.4501 | ambiguous | 0.22 | Stabilizing | 0.662 | D | 0.562 | neutral | None | None | None | None | I |
E/M | 0.6859 | likely_pathogenic | 0.5503 | ambiguous | -0.041 | Destabilizing | 0.989 | D | 0.736 | deleterious | None | None | None | None | I |
E/N | 0.4047 | ambiguous | 0.2676 | benign | 0.187 | Stabilizing | 0.662 | D | 0.508 | neutral | None | None | None | None | I |
E/P | 0.4641 | ambiguous | 0.365 | ambiguous | 0.175 | Stabilizing | 0.888 | D | 0.597 | neutral | None | None | None | None | I |
E/Q | 0.2689 | likely_benign | 0.1886 | benign | 0.185 | Stabilizing | 0.747 | D | 0.531 | neutral | N | 0.497922676 | None | None | I |
E/R | 0.4858 | ambiguous | 0.3461 | ambiguous | 0.599 | Stabilizing | 0.797 | D | 0.579 | neutral | None | None | None | None | I |
E/S | 0.2672 | likely_benign | 0.1838 | benign | 0.04 | Stabilizing | 0.359 | N | 0.451 | neutral | None | None | None | None | I |
E/T | 0.3083 | likely_benign | 0.216 | benign | 0.126 | Stabilizing | 0.033 | N | 0.411 | neutral | None | None | None | None | I |
E/V | 0.3526 | ambiguous | 0.2526 | benign | 0.175 | Stabilizing | 0.597 | D | 0.485 | neutral | N | 0.45930836 | None | None | I |
E/W | 0.951 | likely_pathogenic | 0.9073 | pathogenic | -0.018 | Destabilizing | 0.989 | D | 0.765 | deleterious | None | None | None | None | I |
E/Y | 0.7994 | likely_pathogenic | 0.6754 | pathogenic | 0.177 | Stabilizing | 0.96 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.