Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21461 | 64606;64607;64608 | chr2:178586520;178586519;178586518 | chr2:179451247;179451246;179451245 |
N2AB | 19820 | 59683;59684;59685 | chr2:178586520;178586519;178586518 | chr2:179451247;179451246;179451245 |
N2A | 18893 | 56902;56903;56904 | chr2:178586520;178586519;178586518 | chr2:179451247;179451246;179451245 |
N2B | 12396 | 37411;37412;37413 | chr2:178586520;178586519;178586518 | chr2:179451247;179451246;179451245 |
Novex-1 | 12521 | 37786;37787;37788 | chr2:178586520;178586519;178586518 | chr2:179451247;179451246;179451245 |
Novex-2 | 12588 | 37987;37988;37989 | chr2:178586520;178586519;178586518 | chr2:179451247;179451246;179451245 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.003 | N | 0.096 | 0.16 | 0.275641507738 | gnomAD-4.0.0 | 1.59305E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86193E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4846 | ambiguous | 0.4722 | ambiguous | -1.88 | Destabilizing | 0.982 | D | 0.611 | neutral | None | None | None | None | N |
A/D | 0.9889 | likely_pathogenic | 0.984 | pathogenic | -3.136 | Highly Destabilizing | 0.976 | D | 0.693 | prob.delet. | N | 0.501907253 | None | None | N |
A/E | 0.9666 | likely_pathogenic | 0.9588 | pathogenic | -2.993 | Highly Destabilizing | 0.939 | D | 0.657 | prob.neutral | None | None | None | None | N |
A/F | 0.862 | likely_pathogenic | 0.8567 | pathogenic | -0.9 | Destabilizing | 0.897 | D | 0.693 | prob.delet. | None | None | None | None | N |
A/G | 0.4956 | ambiguous | 0.446 | ambiguous | -1.743 | Destabilizing | 0.92 | D | 0.605 | neutral | N | 0.501653763 | None | None | N |
A/H | 0.987 | likely_pathogenic | 0.9848 | pathogenic | -1.801 | Destabilizing | 0.995 | D | 0.633 | neutral | None | None | None | None | N |
A/I | 0.2272 | likely_benign | 0.2089 | benign | -0.376 | Destabilizing | 0.003 | N | 0.309 | neutral | None | None | None | None | N |
A/K | 0.9888 | likely_pathogenic | 0.986 | pathogenic | -1.51 | Destabilizing | 0.834 | D | 0.67 | prob.neutral | None | None | None | None | N |
A/L | 0.3375 | likely_benign | 0.3335 | benign | -0.376 | Destabilizing | 0.182 | N | 0.509 | neutral | None | None | None | None | N |
A/M | 0.4541 | ambiguous | 0.4511 | ambiguous | -0.817 | Destabilizing | 0.897 | D | 0.698 | prob.delet. | None | None | None | None | N |
A/N | 0.9236 | likely_pathogenic | 0.9052 | pathogenic | -1.864 | Destabilizing | 0.982 | D | 0.738 | deleterious | None | None | None | None | N |
A/P | 0.6136 | likely_pathogenic | 0.5658 | pathogenic | -0.669 | Destabilizing | 0.976 | D | 0.703 | prob.delet. | D | 0.523146408 | None | None | N |
A/Q | 0.9482 | likely_pathogenic | 0.946 | pathogenic | -1.803 | Destabilizing | 0.982 | D | 0.722 | deleterious | None | None | None | None | N |
A/R | 0.9719 | likely_pathogenic | 0.967 | pathogenic | -1.381 | Destabilizing | 0.982 | D | 0.701 | prob.delet. | None | None | None | None | N |
A/S | 0.3531 | ambiguous | 0.326 | benign | -2.156 | Highly Destabilizing | 0.791 | D | 0.587 | neutral | N | 0.499118868 | None | None | N |
A/T | 0.3353 | likely_benign | 0.2857 | benign | -1.915 | Destabilizing | 0.651 | D | 0.583 | neutral | N | 0.5219329 | None | None | N |
A/V | 0.1392 | likely_benign | 0.1185 | benign | -0.669 | Destabilizing | 0.003 | N | 0.096 | neutral | N | 0.428558592 | None | None | N |
A/W | 0.9893 | likely_pathogenic | 0.9885 | pathogenic | -1.527 | Destabilizing | 0.995 | D | 0.729 | deleterious | None | None | None | None | N |
A/Y | 0.9648 | likely_pathogenic | 0.9573 | pathogenic | -1.099 | Destabilizing | 0.982 | D | 0.722 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.