Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2148 | 6667;6668;6669 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
N2AB | 2148 | 6667;6668;6669 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
N2A | 2148 | 6667;6668;6669 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
N2B | 2102 | 6529;6530;6531 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
Novex-1 | 2102 | 6529;6530;6531 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
Novex-2 | 2102 | 6529;6530;6531 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
Novex-3 | 2148 | 6667;6668;6669 | chr2:178775422;178775421;178775420 | chr2:179640149;179640148;179640147 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs2092111633 | None | 0.999 | N | 0.599 | 0.237 | 0.410469974859 | gnomAD-4.0.0 | 1.59072E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85657E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2247 | likely_benign | 0.2545 | benign | -0.689 | Destabilizing | 0.998 | D | 0.466 | neutral | None | None | None | None | I |
S/C | 0.6086 | likely_pathogenic | 0.628 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.572533989 | None | None | I |
S/D | 0.9712 | likely_pathogenic | 0.9759 | pathogenic | -0.777 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
S/E | 0.9701 | likely_pathogenic | 0.9718 | pathogenic | -0.721 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
S/F | 0.934 | likely_pathogenic | 0.9381 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
S/G | 0.4476 | ambiguous | 0.4991 | ambiguous | -1.007 | Destabilizing | 0.999 | D | 0.578 | neutral | D | 0.595278857 | None | None | I |
S/H | 0.9531 | likely_pathogenic | 0.958 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
S/I | 0.8601 | likely_pathogenic | 0.8722 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.814 | deleterious | N | 0.48541644 | None | None | I |
S/K | 0.9962 | likely_pathogenic | 0.9965 | pathogenic | -0.722 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
S/L | 0.646 | likely_pathogenic | 0.6744 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
S/M | 0.7555 | likely_pathogenic | 0.7768 | pathogenic | 0.356 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
S/N | 0.7571 | likely_pathogenic | 0.8007 | pathogenic | -0.891 | Destabilizing | 0.999 | D | 0.599 | neutral | N | 0.510053053 | None | None | I |
S/P | 0.8374 | likely_pathogenic | 0.8809 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
S/Q | 0.9604 | likely_pathogenic | 0.9641 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
S/R | 0.9915 | likely_pathogenic | 0.9923 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.498267087 | None | None | I |
S/T | 0.3957 | ambiguous | 0.4353 | ambiguous | -0.754 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.476070012 | None | None | I |
S/V | 0.7829 | likely_pathogenic | 0.8068 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
S/W | 0.9523 | likely_pathogenic | 0.9565 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
S/Y | 0.9082 | likely_pathogenic | 0.9172 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.