Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21480 | 64663;64664;64665 | chr2:178585306;178585305;178585304 | chr2:179450033;179450032;179450031 |
N2AB | 19839 | 59740;59741;59742 | chr2:178585306;178585305;178585304 | chr2:179450033;179450032;179450031 |
N2A | 18912 | 56959;56960;56961 | chr2:178585306;178585305;178585304 | chr2:179450033;179450032;179450031 |
N2B | 12415 | 37468;37469;37470 | chr2:178585306;178585305;178585304 | chr2:179450033;179450032;179450031 |
Novex-1 | 12540 | 37843;37844;37845 | chr2:178585306;178585305;178585304 | chr2:179450033;179450032;179450031 |
Novex-2 | 12607 | 38044;38045;38046 | chr2:178585306;178585305;178585304 | chr2:179450033;179450032;179450031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.703 | 0.291 | 0.225902525712 | gnomAD-4.0.0 | 6.85782E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00774E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.78 | likely_pathogenic | 0.6705 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
A/D | 0.9151 | likely_pathogenic | 0.8355 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.457466541 | None | None | N |
A/E | 0.7584 | likely_pathogenic | 0.6528 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
A/F | 0.8529 | likely_pathogenic | 0.7635 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/G | 0.3635 | ambiguous | 0.2787 | benign | -0.839 | Destabilizing | 1.0 | D | 0.539 | neutral | N | 0.487180591 | None | None | N |
A/H | 0.8662 | likely_pathogenic | 0.8047 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
A/I | 0.6781 | likely_pathogenic | 0.522 | ambiguous | -0.341 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/K | 0.8191 | likely_pathogenic | 0.7311 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/L | 0.6674 | likely_pathogenic | 0.5369 | ambiguous | -0.341 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
A/M | 0.6149 | likely_pathogenic | 0.4818 | ambiguous | -0.335 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/N | 0.7615 | likely_pathogenic | 0.6422 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
A/P | 0.9045 | likely_pathogenic | 0.8001 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.470771403 | None | None | N |
A/Q | 0.6708 | likely_pathogenic | 0.6009 | pathogenic | -0.926 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
A/R | 0.7497 | likely_pathogenic | 0.675 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
A/S | 0.1957 | likely_benign | 0.1601 | benign | -1.027 | Destabilizing | 1.0 | D | 0.554 | neutral | N | 0.49782581 | None | None | N |
A/T | 0.3735 | ambiguous | 0.2494 | benign | -1.021 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.452667148 | None | None | N |
A/V | 0.3434 | ambiguous | 0.2368 | benign | -0.406 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.497457664 | None | None | N |
A/W | 0.974 | likely_pathogenic | 0.9511 | pathogenic | -1.136 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/Y | 0.8783 | likely_pathogenic | 0.7981 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.