Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21482 | 64669;64670;64671 | chr2:178585300;178585299;178585298 | chr2:179450027;179450026;179450025 |
N2AB | 19841 | 59746;59747;59748 | chr2:178585300;178585299;178585298 | chr2:179450027;179450026;179450025 |
N2A | 18914 | 56965;56966;56967 | chr2:178585300;178585299;178585298 | chr2:179450027;179450026;179450025 |
N2B | 12417 | 37474;37475;37476 | chr2:178585300;178585299;178585298 | chr2:179450027;179450026;179450025 |
Novex-1 | 12542 | 37849;37850;37851 | chr2:178585300;178585299;178585298 | chr2:179450027;179450026;179450025 |
Novex-2 | 12609 | 38050;38051;38052 | chr2:178585300;178585299;178585298 | chr2:179450027;179450026;179450025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs113935908 | None | 0.454 | N | 0.469 | 0.084 | 0.165133752707 | gnomAD-4.0.0 | 2.74144E-06 | None | None | None | None | N | None | 3.00788E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80082E-06 | 0 | 1.65948E-05 |
K/N | rs1232234781 | -0.266 | 0.801 | N | 0.377 | 0.141 | 0.149567049428 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/N | rs1232234781 | -0.266 | 0.801 | N | 0.377 | 0.141 | 0.149567049428 | gnomAD-4.0.0 | 1.59755E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4511 | ambiguous | 0.3893 | ambiguous | -0.175 | Destabilizing | 0.525 | D | 0.363 | neutral | None | None | None | None | N |
K/C | 0.6862 | likely_pathogenic | 0.6502 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.445 | neutral | None | None | None | None | N |
K/D | 0.5444 | ambiguous | 0.4703 | ambiguous | 0.11 | Stabilizing | 0.842 | D | 0.343 | neutral | None | None | None | None | N |
K/E | 0.2118 | likely_benign | 0.1753 | benign | 0.164 | Stabilizing | 0.454 | N | 0.469 | neutral | N | 0.423034476 | None | None | N |
K/F | 0.8779 | likely_pathogenic | 0.8589 | pathogenic | -0.143 | Destabilizing | 0.991 | D | 0.445 | neutral | None | None | None | None | N |
K/G | 0.4623 | ambiguous | 0.3973 | ambiguous | -0.453 | Destabilizing | 0.842 | D | 0.395 | neutral | None | None | None | None | N |
K/H | 0.3087 | likely_benign | 0.2807 | benign | -0.739 | Destabilizing | 0.974 | D | 0.341 | neutral | None | None | None | None | N |
K/I | 0.6415 | likely_pathogenic | 0.5918 | pathogenic | 0.5 | Stabilizing | 0.966 | D | 0.444 | neutral | N | 0.459415097 | None | None | N |
K/L | 0.5248 | ambiguous | 0.465 | ambiguous | 0.5 | Stabilizing | 0.842 | D | 0.406 | neutral | None | None | None | None | N |
K/M | 0.3471 | ambiguous | 0.3164 | benign | 0.233 | Stabilizing | 0.974 | D | 0.339 | neutral | None | None | None | None | N |
K/N | 0.4171 | ambiguous | 0.3664 | ambiguous | -0.022 | Destabilizing | 0.801 | D | 0.377 | neutral | N | 0.457747269 | None | None | N |
K/P | 0.958 | likely_pathogenic | 0.9369 | pathogenic | 0.305 | Stabilizing | 0.974 | D | 0.317 | neutral | None | None | None | None | N |
K/Q | 0.1195 | likely_benign | 0.109 | benign | -0.121 | Destabilizing | 0.051 | N | 0.299 | neutral | N | 0.437582641 | None | None | N |
K/R | 0.0964 | likely_benign | 0.0908 | benign | -0.251 | Destabilizing | 0.669 | D | 0.433 | neutral | N | 0.467156186 | None | None | N |
K/S | 0.4086 | ambiguous | 0.3564 | ambiguous | -0.568 | Destabilizing | 0.08 | N | 0.191 | neutral | None | None | None | None | N |
K/T | 0.2413 | likely_benign | 0.2163 | benign | -0.335 | Destabilizing | 0.669 | D | 0.366 | neutral | N | 0.456843192 | None | None | N |
K/V | 0.5228 | ambiguous | 0.4782 | ambiguous | 0.305 | Stabilizing | 0.915 | D | 0.401 | neutral | None | None | None | None | N |
K/W | 0.8361 | likely_pathogenic | 0.8163 | pathogenic | -0.111 | Destabilizing | 0.998 | D | 0.559 | neutral | None | None | None | None | N |
K/Y | 0.6984 | likely_pathogenic | 0.6534 | pathogenic | 0.211 | Stabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.