Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21484 | 64675;64676;64677 | chr2:178585294;178585293;178585292 | chr2:179450021;179450020;179450019 |
N2AB | 19843 | 59752;59753;59754 | chr2:178585294;178585293;178585292 | chr2:179450021;179450020;179450019 |
N2A | 18916 | 56971;56972;56973 | chr2:178585294;178585293;178585292 | chr2:179450021;179450020;179450019 |
N2B | 12419 | 37480;37481;37482 | chr2:178585294;178585293;178585292 | chr2:179450021;179450020;179450019 |
Novex-1 | 12544 | 37855;37856;37857 | chr2:178585294;178585293;178585292 | chr2:179450021;179450020;179450019 |
Novex-2 | 12611 | 38056;38057;38058 | chr2:178585294;178585293;178585292 | chr2:179450021;179450020;179450019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.869 | 0.533 | 0.735635039567 | gnomAD-4.0.0 | 1.59651E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86628E-06 | 0 | 0 |
L/V | None | None | 0.992 | N | 0.556 | 0.278 | 0.341226946553 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7739 | likely_pathogenic | 0.6807 | pathogenic | -2.161 | Highly Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/C | 0.7789 | likely_pathogenic | 0.7292 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/D | 0.9976 | likely_pathogenic | 0.9944 | pathogenic | -2.167 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/E | 0.9845 | likely_pathogenic | 0.9683 | pathogenic | -1.95 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/F | 0.5463 | ambiguous | 0.4292 | ambiguous | -1.213 | Destabilizing | 0.999 | D | 0.785 | deleterious | N | 0.512507261 | None | None | N |
L/G | 0.9548 | likely_pathogenic | 0.9196 | pathogenic | -2.68 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/H | 0.9619 | likely_pathogenic | 0.9174 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.484764735 | None | None | N |
L/I | 0.1824 | likely_benign | 0.1589 | benign | -0.682 | Destabilizing | 0.992 | D | 0.55 | neutral | N | 0.489494328 | None | None | N |
L/K | 0.9737 | likely_pathogenic | 0.9444 | pathogenic | -1.768 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/M | 0.1988 | likely_benign | 0.1759 | benign | -0.634 | Destabilizing | 0.967 | D | 0.344 | neutral | None | None | None | None | N |
L/N | 0.9845 | likely_pathogenic | 0.9665 | pathogenic | -2.139 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
L/P | 0.9929 | likely_pathogenic | 0.9859 | pathogenic | -1.153 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.484764735 | None | None | N |
L/Q | 0.926 | likely_pathogenic | 0.8526 | pathogenic | -1.984 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/R | 0.9574 | likely_pathogenic | 0.9133 | pathogenic | -1.495 | Destabilizing | 0.999 | D | 0.843 | deleterious | N | 0.502615501 | None | None | N |
L/S | 0.9686 | likely_pathogenic | 0.9331 | pathogenic | -2.836 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/T | 0.8706 | likely_pathogenic | 0.7966 | pathogenic | -2.461 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1998 | likely_benign | 0.1749 | benign | -1.153 | Destabilizing | 0.992 | D | 0.556 | neutral | N | 0.447604846 | None | None | N |
L/W | 0.9112 | likely_pathogenic | 0.8412 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/Y | 0.8969 | likely_pathogenic | 0.8227 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.