Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21487 | 64684;64685;64686 | chr2:178585285;178585284;178585283 | chr2:179450012;179450011;179450010 |
N2AB | 19846 | 59761;59762;59763 | chr2:178585285;178585284;178585283 | chr2:179450012;179450011;179450010 |
N2A | 18919 | 56980;56981;56982 | chr2:178585285;178585284;178585283 | chr2:179450012;179450011;179450010 |
N2B | 12422 | 37489;37490;37491 | chr2:178585285;178585284;178585283 | chr2:179450012;179450011;179450010 |
Novex-1 | 12547 | 37864;37865;37866 | chr2:178585285;178585284;178585283 | chr2:179450012;179450011;179450010 |
Novex-2 | 12614 | 38065;38066;38067 | chr2:178585285;178585284;178585283 | chr2:179450012;179450011;179450010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2048679694 | None | 0.275 | N | 0.261 | 0.085 | 0.30212335484 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
E/D | rs2048679694 | None | 0.275 | N | 0.261 | 0.085 | 0.30212335484 | gnomAD-4.0.0 | 2.56766E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.34647E-05 | 2.84917E-05 |
E/K | rs1485546407 | None | 0.992 | N | 0.525 | 0.401 | 0.421427970867 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs1485546407 | None | 0.992 | N | 0.525 | 0.401 | 0.421427970867 | gnomAD-4.0.0 | 4.96307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.7856E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3497 | ambiguous | 0.3367 | benign | -0.818 | Destabilizing | 0.996 | D | 0.621 | neutral | N | 0.493329787 | None | None | N |
E/C | 0.9502 | likely_pathogenic | 0.9506 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2936 | likely_benign | 0.2757 | benign | -0.933 | Destabilizing | 0.275 | N | 0.261 | neutral | N | 0.483401515 | None | None | N |
E/F | 0.9178 | likely_pathogenic | 0.9103 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/G | 0.5413 | ambiguous | 0.5058 | ambiguous | -1.146 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | D | 0.529084224 | None | None | N |
E/H | 0.7456 | likely_pathogenic | 0.7228 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/I | 0.6074 | likely_pathogenic | 0.5924 | pathogenic | 0.066 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/K | 0.4677 | ambiguous | 0.4243 | ambiguous | -0.539 | Destabilizing | 0.992 | D | 0.525 | neutral | N | 0.514492426 | None | None | N |
E/L | 0.6826 | likely_pathogenic | 0.6602 | pathogenic | 0.066 | Stabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
E/M | 0.7259 | likely_pathogenic | 0.7072 | pathogenic | 0.451 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/N | 0.6015 | likely_pathogenic | 0.585 | pathogenic | -0.936 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/P | 0.8023 | likely_pathogenic | 0.7988 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/Q | 0.2881 | likely_benign | 0.2707 | benign | -0.828 | Destabilizing | 0.999 | D | 0.651 | neutral | D | 0.533424904 | None | None | N |
E/R | 0.6132 | likely_pathogenic | 0.5783 | pathogenic | -0.236 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
E/S | 0.4639 | ambiguous | 0.4464 | ambiguous | -1.207 | Destabilizing | 0.994 | D | 0.566 | neutral | None | None | None | None | N |
E/T | 0.4356 | ambiguous | 0.4236 | ambiguous | -0.942 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/V | 0.396 | ambiguous | 0.3949 | ambiguous | -0.207 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.493293788 | None | None | N |
E/W | 0.976 | likely_pathogenic | 0.9717 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Y | 0.8795 | likely_pathogenic | 0.8638 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.