Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2149 | 6670;6671;6672 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
N2AB | 2149 | 6670;6671;6672 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
N2A | 2149 | 6670;6671;6672 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
N2B | 2103 | 6532;6533;6534 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
Novex-1 | 2103 | 6532;6533;6534 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
Novex-2 | 2103 | 6532;6533;6534 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
Novex-3 | 2149 | 6670;6671;6672 | chr2:178775419;178775418;178775417 | chr2:179640146;179640145;179640144 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs967525723 | None | 0.889 | D | 0.496 | 0.45 | 0.619116397592 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/L | rs967525723 | None | 0.889 | D | 0.496 | 0.45 | 0.619116397592 | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46981E-05 | 0 | 0 |
I/V | rs967525723 | None | 0.333 | N | 0.373 | 0.252 | 0.586174608782 | gnomAD-4.0.0 | 1.36821E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7986E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9657 | likely_pathogenic | 0.9696 | pathogenic | -2.671 | Highly Destabilizing | 0.992 | D | 0.749 | deleterious | None | None | None | None | N |
I/C | 0.9698 | likely_pathogenic | 0.974 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
I/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.525 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/E | 0.9982 | likely_pathogenic | 0.9983 | pathogenic | -3.202 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/F | 0.3124 | likely_benign | 0.3193 | benign | -1.685 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | N | 0.48724582 | None | None | N |
I/G | 0.9962 | likely_pathogenic | 0.9968 | pathogenic | -3.275 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/H | 0.9924 | likely_pathogenic | 0.9927 | pathogenic | -3.085 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/K | 0.9967 | likely_pathogenic | 0.9968 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
I/L | 0.2053 | likely_benign | 0.2131 | benign | -0.85 | Destabilizing | 0.889 | D | 0.496 | neutral | D | 0.525036179 | None | None | N |
I/M | 0.2786 | likely_benign | 0.2857 | benign | -0.952 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | D | 0.592007342 | None | None | N |
I/N | 0.9894 | likely_pathogenic | 0.9901 | pathogenic | -2.863 | Highly Destabilizing | 0.999 | D | 0.87 | deleterious | D | 0.591204003 | None | None | N |
I/P | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
I/Q | 0.9953 | likely_pathogenic | 0.9957 | pathogenic | -2.502 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/R | 0.9929 | likely_pathogenic | 0.9931 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/S | 0.984 | likely_pathogenic | 0.9863 | pathogenic | -3.375 | Highly Destabilizing | 0.998 | D | 0.834 | deleterious | D | 0.591204003 | None | None | N |
I/T | 0.9573 | likely_pathogenic | 0.9609 | pathogenic | -2.889 | Highly Destabilizing | 0.989 | D | 0.774 | deleterious | D | 0.592007342 | None | None | N |
I/V | 0.0964 | likely_benign | 0.0951 | benign | -1.448 | Destabilizing | 0.333 | N | 0.373 | neutral | N | 0.467379771 | None | None | N |
I/W | 0.9752 | likely_pathogenic | 0.9764 | pathogenic | -2.162 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
I/Y | 0.8464 | likely_pathogenic | 0.8493 | pathogenic | -1.905 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.