Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21502 | 64729;64730;64731 | chr2:178585240;178585239;178585238 | chr2:179449967;179449966;179449965 |
N2AB | 19861 | 59806;59807;59808 | chr2:178585240;178585239;178585238 | chr2:179449967;179449966;179449965 |
N2A | 18934 | 57025;57026;57027 | chr2:178585240;178585239;178585238 | chr2:179449967;179449966;179449965 |
N2B | 12437 | 37534;37535;37536 | chr2:178585240;178585239;178585238 | chr2:179449967;179449966;179449965 |
Novex-1 | 12562 | 37909;37910;37911 | chr2:178585240;178585239;178585238 | chr2:179449967;179449966;179449965 |
Novex-2 | 12629 | 38110;38111;38112 | chr2:178585240;178585239;178585238 | chr2:179449967;179449966;179449965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1199736147 | -0.066 | 0.704 | N | 0.494 | 0.355 | 0.352476196916 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.67131E-04 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1199736147 | -0.066 | 0.704 | N | 0.494 | 0.355 | 0.352476196916 | gnomAD-4.0.0 | 4.77681E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.3227E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6933 | likely_pathogenic | 0.5941 | pathogenic | -0.806 | Destabilizing | 0.863 | D | 0.463 | neutral | None | None | None | None | N |
K/C | 0.7142 | likely_pathogenic | 0.633 | pathogenic | -0.806 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
K/D | 0.9024 | likely_pathogenic | 0.8655 | pathogenic | 0.123 | Stabilizing | 0.939 | D | 0.513 | neutral | None | None | None | None | N |
K/E | 0.5302 | ambiguous | 0.442 | ambiguous | 0.226 | Stabilizing | 0.704 | D | 0.494 | neutral | N | 0.50130619 | None | None | N |
K/F | 0.8485 | likely_pathogenic | 0.7908 | pathogenic | -0.738 | Destabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | N |
K/G | 0.8611 | likely_pathogenic | 0.8075 | pathogenic | -1.135 | Destabilizing | 0.969 | D | 0.497 | neutral | None | None | None | None | N |
K/H | 0.403 | ambiguous | 0.349 | ambiguous | -1.523 | Destabilizing | 0.991 | D | 0.563 | neutral | None | None | None | None | N |
K/I | 0.4696 | ambiguous | 0.3983 | ambiguous | 0.034 | Stabilizing | 0.996 | D | 0.576 | neutral | N | 0.488517853 | None | None | N |
K/L | 0.4951 | ambiguous | 0.4091 | ambiguous | 0.034 | Stabilizing | 0.939 | D | 0.497 | neutral | None | None | None | None | N |
K/M | 0.3418 | ambiguous | 0.2764 | benign | -0.01 | Destabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
K/N | 0.7398 | likely_pathogenic | 0.6702 | pathogenic | -0.373 | Destabilizing | 0.959 | D | 0.508 | neutral | N | 0.5010527 | None | None | N |
K/P | 0.9826 | likely_pathogenic | 0.9763 | pathogenic | -0.217 | Destabilizing | 0.997 | D | 0.553 | neutral | None | None | None | None | N |
K/Q | 0.2291 | likely_benign | 0.1933 | benign | -0.478 | Destabilizing | 0.31 | N | 0.189 | neutral | N | 0.471085161 | None | None | N |
K/R | 0.0809 | likely_benign | 0.074 | benign | -0.468 | Destabilizing | 0.015 | N | 0.147 | neutral | N | 0.430296883 | None | None | N |
K/S | 0.7722 | likely_pathogenic | 0.6782 | pathogenic | -1.148 | Destabilizing | 0.939 | D | 0.47 | neutral | None | None | None | None | N |
K/T | 0.4752 | ambiguous | 0.3788 | ambiguous | -0.831 | Destabilizing | 0.959 | D | 0.507 | neutral | N | 0.489278321 | None | None | N |
K/V | 0.4649 | ambiguous | 0.3833 | ambiguous | -0.217 | Destabilizing | 0.991 | D | 0.552 | neutral | None | None | None | None | N |
K/W | 0.7933 | likely_pathogenic | 0.748 | pathogenic | -0.558 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
K/Y | 0.6752 | likely_pathogenic | 0.6102 | pathogenic | -0.242 | Destabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.