Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21505 | 64738;64739;64740 | chr2:178585231;178585230;178585229 | chr2:179449958;179449957;179449956 |
N2AB | 19864 | 59815;59816;59817 | chr2:178585231;178585230;178585229 | chr2:179449958;179449957;179449956 |
N2A | 18937 | 57034;57035;57036 | chr2:178585231;178585230;178585229 | chr2:179449958;179449957;179449956 |
N2B | 12440 | 37543;37544;37545 | chr2:178585231;178585230;178585229 | chr2:179449958;179449957;179449956 |
Novex-1 | 12565 | 37918;37919;37920 | chr2:178585231;178585230;178585229 | chr2:179449958;179449957;179449956 |
Novex-2 | 12632 | 38119;38120;38121 | chr2:178585231;178585230;178585229 | chr2:179449958;179449957;179449956 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.324 | N | 0.318 | 0.194 | 0.225215365344 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0904 | likely_benign | 0.0854 | benign | -0.224 | Destabilizing | 0.193 | N | 0.349 | neutral | N | 0.456558843 | None | None | N |
D/C | 0.3793 | ambiguous | 0.3685 | ambiguous | -0.006 | Destabilizing | 0.981 | D | 0.455 | neutral | None | None | None | None | N |
D/E | 0.0705 | likely_benign | 0.0689 | benign | -0.297 | Destabilizing | None | N | 0.163 | neutral | N | 0.416384302 | None | None | N |
D/F | 0.3531 | ambiguous | 0.3593 | ambiguous | -0.222 | Destabilizing | 0.818 | D | 0.425 | neutral | None | None | None | None | N |
D/G | 0.1161 | likely_benign | 0.1134 | benign | -0.407 | Destabilizing | 0.324 | N | 0.331 | neutral | N | 0.442418897 | None | None | N |
D/H | 0.1622 | likely_benign | 0.1598 | benign | -0.029 | Destabilizing | 0.003 | N | 0.287 | neutral | N | 0.485246955 | None | None | N |
D/I | 0.1448 | likely_benign | 0.1415 | benign | 0.205 | Stabilizing | 0.818 | D | 0.429 | neutral | None | None | None | None | N |
D/K | 0.1597 | likely_benign | 0.1536 | benign | 0.264 | Stabilizing | 0.241 | N | 0.317 | neutral | None | None | None | None | N |
D/L | 0.1856 | likely_benign | 0.1828 | benign | 0.205 | Stabilizing | 0.69 | D | 0.414 | neutral | None | None | None | None | N |
D/M | 0.2493 | likely_benign | 0.2496 | benign | 0.268 | Stabilizing | 0.944 | D | 0.424 | neutral | None | None | None | None | N |
D/N | 0.0738 | likely_benign | 0.0746 | benign | 0.033 | Stabilizing | 0.324 | N | 0.318 | neutral | N | 0.445669846 | None | None | N |
D/P | 0.6899 | likely_pathogenic | 0.6906 | pathogenic | 0.084 | Stabilizing | 0.818 | D | 0.327 | neutral | None | None | None | None | N |
D/Q | 0.1375 | likely_benign | 0.136 | benign | 0.053 | Stabilizing | 0.008 | N | 0.208 | neutral | None | None | None | None | N |
D/R | 0.2188 | likely_benign | 0.2183 | benign | 0.436 | Stabilizing | 0.241 | N | 0.421 | neutral | None | None | None | None | N |
D/S | 0.0845 | likely_benign | 0.082 | benign | -0.083 | Destabilizing | 0.241 | N | 0.291 | neutral | None | None | None | None | N |
D/T | 0.1003 | likely_benign | 0.0949 | benign | 0.054 | Stabilizing | 0.388 | N | 0.36 | neutral | None | None | None | None | N |
D/V | 0.0925 | likely_benign | 0.0888 | benign | 0.084 | Stabilizing | 0.627 | D | 0.409 | neutral | N | 0.412077347 | None | None | N |
D/W | 0.6721 | likely_pathogenic | 0.6774 | pathogenic | -0.124 | Destabilizing | 0.981 | D | 0.501 | neutral | None | None | None | None | N |
D/Y | 0.1392 | likely_benign | 0.1375 | benign | 0.002 | Stabilizing | 0.627 | D | 0.433 | neutral | N | 0.511990839 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.