Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21507 | 64744;64745;64746 | chr2:178585225;178585224;178585223 | chr2:179449952;179449951;179449950 |
N2AB | 19866 | 59821;59822;59823 | chr2:178585225;178585224;178585223 | chr2:179449952;179449951;179449950 |
N2A | 18939 | 57040;57041;57042 | chr2:178585225;178585224;178585223 | chr2:179449952;179449951;179449950 |
N2B | 12442 | 37549;37550;37551 | chr2:178585225;178585224;178585223 | chr2:179449952;179449951;179449950 |
Novex-1 | 12567 | 37924;37925;37926 | chr2:178585225;178585224;178585223 | chr2:179449952;179449951;179449950 |
Novex-2 | 12634 | 38125;38126;38127 | chr2:178585225;178585224;178585223 | chr2:179449952;179449951;179449950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.991 | D | 0.623 | 0.37 | 0.82847125625 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
V/L | None | None | 0.76 | N | 0.406 | 0.278 | 0.318540980066 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.311 | likely_benign | 0.2882 | benign | -1.637 | Destabilizing | 0.046 | N | 0.37 | neutral | N | 0.497711106 | None | None | I |
V/C | 0.8901 | likely_pathogenic | 0.8837 | pathogenic | -1.152 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | I |
V/D | 0.8875 | likely_pathogenic | 0.8308 | pathogenic | -1.594 | Destabilizing | 0.991 | D | 0.736 | prob.delet. | N | 0.499232043 | None | None | I |
V/E | 0.809 | likely_pathogenic | 0.7465 | pathogenic | -1.434 | Destabilizing | 0.986 | D | 0.674 | neutral | None | None | None | None | I |
V/F | 0.4084 | ambiguous | 0.3858 | ambiguous | -0.958 | Destabilizing | 0.991 | D | 0.623 | neutral | D | 0.527192364 | None | None | I |
V/G | 0.6018 | likely_pathogenic | 0.5459 | ambiguous | -2.114 | Highly Destabilizing | 0.964 | D | 0.664 | neutral | N | 0.49206602 | None | None | I |
V/H | 0.9493 | likely_pathogenic | 0.9345 | pathogenic | -1.721 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/I | 0.0763 | likely_benign | 0.0774 | benign | -0.355 | Destabilizing | 0.17 | N | 0.315 | neutral | N | 0.440685314 | None | None | I |
V/K | 0.9117 | likely_pathogenic | 0.8778 | pathogenic | -1.359 | Destabilizing | 0.986 | D | 0.673 | neutral | None | None | None | None | I |
V/L | 0.241 | likely_benign | 0.225 | benign | -0.355 | Destabilizing | 0.76 | D | 0.406 | neutral | N | 0.424558281 | None | None | I |
V/M | 0.2309 | likely_benign | 0.221 | benign | -0.378 | Destabilizing | 0.993 | D | 0.541 | neutral | None | None | None | None | I |
V/N | 0.819 | likely_pathogenic | 0.7691 | pathogenic | -1.476 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | I |
V/P | 0.785 | likely_pathogenic | 0.7365 | pathogenic | -0.75 | Destabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | I |
V/Q | 0.8747 | likely_pathogenic | 0.8436 | pathogenic | -1.381 | Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | I |
V/R | 0.8938 | likely_pathogenic | 0.8576 | pathogenic | -1.164 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | I |
V/S | 0.694 | likely_pathogenic | 0.6473 | pathogenic | -2.114 | Highly Destabilizing | 0.973 | D | 0.605 | neutral | None | None | None | None | I |
V/T | 0.3892 | ambiguous | 0.3479 | ambiguous | -1.805 | Destabilizing | 0.953 | D | 0.446 | neutral | None | None | None | None | I |
V/W | 0.9458 | likely_pathogenic | 0.9342 | pathogenic | -1.334 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/Y | 0.8302 | likely_pathogenic | 0.7976 | pathogenic | -0.942 | Destabilizing | 0.998 | D | 0.634 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.