Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21511 | 64756;64757;64758 | chr2:178585213;178585212;178585211 | chr2:179449940;179449939;179449938 |
N2AB | 19870 | 59833;59834;59835 | chr2:178585213;178585212;178585211 | chr2:179449940;179449939;179449938 |
N2A | 18943 | 57052;57053;57054 | chr2:178585213;178585212;178585211 | chr2:179449940;179449939;179449938 |
N2B | 12446 | 37561;37562;37563 | chr2:178585213;178585212;178585211 | chr2:179449940;179449939;179449938 |
Novex-1 | 12571 | 37936;37937;37938 | chr2:178585213;178585212;178585211 | chr2:179449940;179449939;179449938 |
Novex-2 | 12638 | 38137;38138;38139 | chr2:178585213;178585212;178585211 | chr2:179449940;179449939;179449938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.976 | N | 0.358 | 0.266 | 0.262662153117 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0945 | likely_benign | 0.0865 | benign | -0.126 | Destabilizing | 0.863 | D | 0.363 | neutral | None | None | None | None | I |
S/C | 0.2176 | likely_benign | 0.1741 | benign | -0.257 | Destabilizing | 0.999 | D | 0.393 | neutral | N | 0.470646498 | None | None | I |
S/D | 0.4901 | ambiguous | 0.3822 | ambiguous | -0.051 | Destabilizing | 0.02 | N | 0.136 | neutral | None | None | None | None | I |
S/E | 0.6054 | likely_pathogenic | 0.5025 | ambiguous | -0.16 | Destabilizing | 0.17 | N | 0.17 | neutral | None | None | None | None | I |
S/F | 0.3679 | ambiguous | 0.3054 | benign | -0.861 | Destabilizing | 0.997 | D | 0.408 | neutral | None | None | None | None | I |
S/G | 0.1125 | likely_benign | 0.1011 | benign | -0.178 | Destabilizing | 0.826 | D | 0.345 | neutral | N | 0.455090966 | None | None | I |
S/H | 0.4671 | ambiguous | 0.3726 | ambiguous | -0.537 | Destabilizing | 0.997 | D | 0.349 | neutral | None | None | None | None | I |
S/I | 0.2695 | likely_benign | 0.2235 | benign | -0.121 | Destabilizing | 0.996 | D | 0.421 | neutral | N | 0.481749314 | None | None | I |
S/K | 0.7722 | likely_pathogenic | 0.6484 | pathogenic | -0.381 | Destabilizing | 0.939 | D | 0.312 | neutral | None | None | None | None | I |
S/L | 0.136 | likely_benign | 0.1191 | benign | -0.121 | Destabilizing | 0.969 | D | 0.411 | neutral | None | None | None | None | I |
S/M | 0.272 | likely_benign | 0.2427 | benign | -0.077 | Destabilizing | 0.999 | D | 0.355 | neutral | None | None | None | None | I |
S/N | 0.1728 | likely_benign | 0.1488 | benign | -0.064 | Destabilizing | 0.92 | D | 0.336 | neutral | N | 0.480701487 | None | None | I |
S/P | 0.1433 | likely_benign | 0.1127 | benign | -0.098 | Destabilizing | 0.997 | D | 0.355 | neutral | None | None | None | None | I |
S/Q | 0.5651 | likely_pathogenic | 0.4822 | ambiguous | -0.305 | Destabilizing | 0.939 | D | 0.329 | neutral | None | None | None | None | I |
S/R | 0.7444 | likely_pathogenic | 0.6239 | pathogenic | -0.118 | Destabilizing | 0.976 | D | 0.358 | neutral | N | 0.452053448 | None | None | I |
S/T | 0.0966 | likely_benign | 0.0869 | benign | -0.163 | Destabilizing | 0.959 | D | 0.357 | neutral | N | 0.49091848 | None | None | I |
S/V | 0.2477 | likely_benign | 0.2064 | benign | -0.098 | Destabilizing | 0.969 | D | 0.429 | neutral | None | None | None | None | I |
S/W | 0.5359 | ambiguous | 0.448 | ambiguous | -0.957 | Destabilizing | 0.999 | D | 0.51 | neutral | None | None | None | None | I |
S/Y | 0.3354 | likely_benign | 0.2723 | benign | -0.637 | Destabilizing | 0.997 | D | 0.407 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.