Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21512 | 64759;64760;64761 | chr2:178585210;178585209;178585208 | chr2:179449937;179449936;179449935 |
N2AB | 19871 | 59836;59837;59838 | chr2:178585210;178585209;178585208 | chr2:179449937;179449936;179449935 |
N2A | 18944 | 57055;57056;57057 | chr2:178585210;178585209;178585208 | chr2:179449937;179449936;179449935 |
N2B | 12447 | 37564;37565;37566 | chr2:178585210;178585209;178585208 | chr2:179449937;179449936;179449935 |
Novex-1 | 12572 | 37939;37940;37941 | chr2:178585210;178585209;178585208 | chr2:179449937;179449936;179449935 |
Novex-2 | 12639 | 38140;38141;38142 | chr2:178585210;178585209;178585208 | chr2:179449937;179449936;179449935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs774754081 | 0.435 | 0.081 | N | 0.331 | 0.151 | None | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 2.06868E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/L | rs774754081 | 0.435 | 0.081 | N | 0.331 | 0.151 | None | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | N | None | 2.41255E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/L | rs774754081 | 0.435 | 0.081 | N | 0.331 | 0.151 | None | gnomAD-4.0.0 | 1.17773E-05 | None | None | None | None | N | None | 2.00272E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39128E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5154 | ambiguous | 0.3811 | ambiguous | -0.306 | Destabilizing | 0.104 | N | 0.255 | neutral | None | None | None | None | N |
H/C | 0.2761 | likely_benign | 0.1923 | benign | 0.364 | Stabilizing | 0.958 | D | 0.387 | neutral | None | None | None | None | N |
H/D | 0.4804 | ambiguous | 0.3586 | ambiguous | 0.003 | Stabilizing | 0.175 | N | 0.319 | neutral | N | 0.437563998 | None | None | N |
H/E | 0.549 | ambiguous | 0.4202 | ambiguous | 0.061 | Stabilizing | 0.055 | N | 0.214 | neutral | None | None | None | None | N |
H/F | 0.4729 | ambiguous | 0.3755 | ambiguous | 0.485 | Stabilizing | 0.667 | D | 0.429 | neutral | None | None | None | None | N |
H/G | 0.4878 | ambiguous | 0.3754 | ambiguous | -0.638 | Destabilizing | 0.104 | N | 0.296 | neutral | None | None | None | None | N |
H/I | 0.5297 | ambiguous | 0.3996 | ambiguous | 0.575 | Stabilizing | 0.667 | D | 0.489 | neutral | None | None | None | None | N |
H/K | 0.3279 | likely_benign | 0.2508 | benign | -0.18 | Destabilizing | 0.025 | N | 0.203 | neutral | None | None | None | None | N |
H/L | 0.2311 | likely_benign | 0.1745 | benign | 0.575 | Stabilizing | 0.081 | N | 0.331 | neutral | N | 0.465924035 | None | None | N |
H/M | 0.6615 | likely_pathogenic | 0.5627 | ambiguous | 0.443 | Stabilizing | 0.859 | D | 0.365 | neutral | None | None | None | None | N |
H/N | 0.2066 | likely_benign | 0.1602 | benign | -0.115 | Destabilizing | 0.081 | N | 0.261 | neutral | N | 0.43290754 | None | None | N |
H/P | 0.5897 | likely_pathogenic | 0.4952 | ambiguous | 0.306 | Stabilizing | 0.301 | N | 0.426 | neutral | N | 0.477314465 | None | None | N |
H/Q | 0.2594 | likely_benign | 0.1908 | benign | 0.041 | Stabilizing | 0.175 | N | 0.211 | neutral | N | 0.449666504 | None | None | N |
H/R | 0.1002 | likely_benign | 0.0762 | benign | -0.683 | Destabilizing | None | N | 0.069 | neutral | N | 0.325542427 | None | None | N |
H/S | 0.3829 | ambiguous | 0.2864 | benign | -0.179 | Destabilizing | 0.104 | N | 0.316 | neutral | None | None | None | None | N |
H/T | 0.4357 | ambiguous | 0.3094 | benign | -0.015 | Destabilizing | 0.104 | N | 0.324 | neutral | None | None | None | None | N |
H/V | 0.4585 | ambiguous | 0.3414 | ambiguous | 0.306 | Stabilizing | 0.22 | N | 0.425 | neutral | None | None | None | None | N |
H/W | 0.4813 | ambiguous | 0.4094 | ambiguous | 0.633 | Stabilizing | 0.958 | D | 0.354 | neutral | None | None | None | None | N |
H/Y | 0.1515 | likely_benign | 0.1151 | benign | 0.882 | Stabilizing | 0.301 | N | 0.255 | neutral | N | 0.466270752 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.