Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21518 | 64777;64778;64779 | chr2:178585192;178585191;178585190 | chr2:179449919;179449918;179449917 |
N2AB | 19877 | 59854;59855;59856 | chr2:178585192;178585191;178585190 | chr2:179449919;179449918;179449917 |
N2A | 18950 | 57073;57074;57075 | chr2:178585192;178585191;178585190 | chr2:179449919;179449918;179449917 |
N2B | 12453 | 37582;37583;37584 | chr2:178585192;178585191;178585190 | chr2:179449919;179449918;179449917 |
Novex-1 | 12578 | 37957;37958;37959 | chr2:178585192;178585191;178585190 | chr2:179449919;179449918;179449917 |
Novex-2 | 12645 | 38158;38159;38160 | chr2:178585192;178585191;178585190 | chr2:179449919;179449918;179449917 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.484 | N | 0.271 | 0.224 | 0.36355261348 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4166 | ambiguous | 0.4375 | ambiguous | -0.727 | Destabilizing | 0.935 | D | 0.273 | neutral | None | None | None | None | N |
A/D | 0.2255 | likely_benign | 0.2529 | benign | -0.171 | Destabilizing | 0.38 | N | 0.379 | neutral | None | None | None | None | N |
A/E | 0.2446 | likely_benign | 0.2682 | benign | -0.323 | Destabilizing | 0.117 | N | 0.275 | neutral | N | 0.405244589 | None | None | N |
A/F | 0.3376 | likely_benign | 0.3579 | ambiguous | -0.796 | Destabilizing | 0.555 | D | 0.391 | neutral | None | None | None | None | N |
A/G | 0.0896 | likely_benign | 0.1038 | benign | -0.128 | Destabilizing | None | N | 0.166 | neutral | N | 0.404516657 | None | None | N |
A/H | 0.4244 | ambiguous | 0.4537 | ambiguous | -0.179 | Destabilizing | 0.935 | D | 0.404 | neutral | None | None | None | None | N |
A/I | 0.2466 | likely_benign | 0.2792 | benign | -0.269 | Destabilizing | 0.235 | N | 0.269 | neutral | None | None | None | None | N |
A/K | 0.4071 | ambiguous | 0.4661 | ambiguous | -0.339 | Destabilizing | 0.149 | N | 0.29 | neutral | None | None | None | None | N |
A/L | 0.1639 | likely_benign | 0.1856 | benign | -0.269 | Destabilizing | 0.081 | N | 0.232 | neutral | None | None | None | None | N |
A/M | 0.1754 | likely_benign | 0.1949 | benign | -0.336 | Destabilizing | 0.824 | D | 0.291 | neutral | None | None | None | None | N |
A/N | 0.1617 | likely_benign | 0.1867 | benign | -0.075 | Destabilizing | 0.38 | N | 0.365 | neutral | None | None | None | None | N |
A/P | 0.4881 | ambiguous | 0.5155 | ambiguous | -0.188 | Destabilizing | 0.484 | N | 0.271 | neutral | N | 0.451385097 | None | None | N |
A/Q | 0.3179 | likely_benign | 0.3569 | ambiguous | -0.326 | Destabilizing | 0.555 | D | 0.282 | neutral | None | None | None | None | N |
A/R | 0.4164 | ambiguous | 0.4522 | ambiguous | 0.037 | Stabilizing | 0.38 | N | 0.283 | neutral | None | None | None | None | N |
A/S | 0.0723 | likely_benign | 0.0752 | benign | -0.295 | Destabilizing | 0.027 | N | 0.346 | neutral | N | 0.386352184 | None | None | N |
A/T | 0.07 | likely_benign | 0.0745 | benign | -0.366 | Destabilizing | None | N | 0.163 | neutral | N | 0.35466384 | None | None | N |
A/V | 0.1227 | likely_benign | 0.1341 | benign | -0.188 | Destabilizing | 0.062 | N | 0.247 | neutral | N | 0.432105903 | None | None | N |
A/W | 0.6881 | likely_pathogenic | 0.7154 | pathogenic | -0.917 | Destabilizing | 0.935 | D | 0.501 | neutral | None | None | None | None | N |
A/Y | 0.4253 | ambiguous | 0.4499 | ambiguous | -0.564 | Destabilizing | 0.555 | D | 0.395 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.