Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21519 | 64780;64781;64782 | chr2:178585189;178585188;178585187 | chr2:179449916;179449915;179449914 |
N2AB | 19878 | 59857;59858;59859 | chr2:178585189;178585188;178585187 | chr2:179449916;179449915;179449914 |
N2A | 18951 | 57076;57077;57078 | chr2:178585189;178585188;178585187 | chr2:179449916;179449915;179449914 |
N2B | 12454 | 37585;37586;37587 | chr2:178585189;178585188;178585187 | chr2:179449916;179449915;179449914 |
Novex-1 | 12579 | 37960;37961;37962 | chr2:178585189;178585188;178585187 | chr2:179449916;179449915;179449914 |
Novex-2 | 12646 | 38161;38162;38163 | chr2:178585189;178585188;178585187 | chr2:179449916;179449915;179449914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1336928920 | -0.415 | None | N | 0.098 | 0.06 | 0.0954503805726 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
D/E | rs1336928920 | -0.415 | None | N | 0.098 | 0.06 | 0.0954503805726 | gnomAD-4.0.0 | 6.84384E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99687E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1018 | likely_benign | 0.0997 | benign | 0.09 | Stabilizing | 0.012 | N | 0.23 | neutral | N | 0.457152623 | None | None | N |
D/C | 0.4887 | ambiguous | 0.4864 | ambiguous | 0.133 | Stabilizing | 0.864 | D | 0.351 | neutral | None | None | None | None | N |
D/E | 0.0873 | likely_benign | 0.0929 | benign | -0.113 | Destabilizing | None | N | 0.098 | neutral | N | 0.43600656 | None | None | N |
D/F | 0.4494 | ambiguous | 0.4363 | ambiguous | -0.147 | Destabilizing | 0.214 | N | 0.381 | neutral | None | None | None | None | N |
D/G | 0.1068 | likely_benign | 0.1058 | benign | -0.007 | Destabilizing | None | N | 0.171 | neutral | N | 0.378128905 | None | None | N |
D/H | 0.2267 | likely_benign | 0.2087 | benign | 0.317 | Stabilizing | 0.295 | N | 0.32 | neutral | N | 0.487302172 | None | None | N |
D/I | 0.2179 | likely_benign | 0.2136 | benign | 0.273 | Stabilizing | 0.038 | N | 0.381 | neutral | None | None | None | None | N |
D/K | 0.2041 | likely_benign | 0.1982 | benign | 0.495 | Stabilizing | 0.016 | N | 0.267 | neutral | None | None | None | None | N |
D/L | 0.2377 | likely_benign | 0.2282 | benign | 0.273 | Stabilizing | None | N | 0.196 | neutral | None | None | None | None | N |
D/M | 0.3887 | ambiguous | 0.3837 | ambiguous | 0.189 | Stabilizing | 0.214 | N | 0.355 | neutral | None | None | None | None | N |
D/N | 0.0878 | likely_benign | 0.0842 | benign | 0.507 | Stabilizing | 0.055 | N | 0.144 | neutral | N | 0.454939037 | None | None | N |
D/P | 0.2551 | likely_benign | 0.2659 | benign | 0.231 | Stabilizing | None | N | 0.19 | neutral | None | None | None | None | N |
D/Q | 0.1848 | likely_benign | 0.1771 | benign | 0.481 | Stabilizing | 0.001 | N | 0.121 | neutral | None | None | None | None | N |
D/R | 0.2601 | likely_benign | 0.2485 | benign | 0.615 | Stabilizing | 0.038 | N | 0.367 | neutral | None | None | None | None | N |
D/S | 0.0941 | likely_benign | 0.0882 | benign | 0.351 | Stabilizing | 0.003 | N | 0.133 | neutral | None | None | None | None | N |
D/T | 0.153 | likely_benign | 0.1449 | benign | 0.423 | Stabilizing | 0.038 | N | 0.266 | neutral | None | None | None | None | N |
D/V | 0.1416 | likely_benign | 0.1391 | benign | 0.231 | Stabilizing | 0.029 | N | 0.293 | neutral | N | 0.469063128 | None | None | N |
D/W | 0.7808 | likely_pathogenic | 0.7726 | pathogenic | -0.16 | Destabilizing | 0.864 | D | 0.367 | neutral | None | None | None | None | N |
D/Y | 0.2287 | likely_benign | 0.2126 | benign | 0.068 | Stabilizing | 0.56 | D | 0.379 | neutral | N | 0.454188085 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.