Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21524 | 64795;64796;64797 | chr2:178585174;178585173;178585172 | chr2:179449901;179449900;179449899 |
N2AB | 19883 | 59872;59873;59874 | chr2:178585174;178585173;178585172 | chr2:179449901;179449900;179449899 |
N2A | 18956 | 57091;57092;57093 | chr2:178585174;178585173;178585172 | chr2:179449901;179449900;179449899 |
N2B | 12459 | 37600;37601;37602 | chr2:178585174;178585173;178585172 | chr2:179449901;179449900;179449899 |
Novex-1 | 12584 | 37975;37976;37977 | chr2:178585174;178585173;178585172 | chr2:179449901;179449900;179449899 |
Novex-2 | 12651 | 38176;38177;38178 | chr2:178585174;178585173;178585172 | chr2:179449901;179449900;179449899 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1378663120 | -0.952 | 0.898 | N | 0.705 | 0.501 | 0.732481921647 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11421E-04 | None | 0 | None | 0 | 0 | 0 |
L/V | rs1378663120 | -0.952 | 0.898 | N | 0.705 | 0.501 | 0.732481921647 | gnomAD-4.0.0 | 3.18443E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54785E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9716 | likely_pathogenic | 0.9545 | pathogenic | -2.298 | Highly Destabilizing | 0.983 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/C | 0.9466 | likely_pathogenic | 0.92 | pathogenic | -1.393 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -3.118 | Highly Destabilizing | 0.999 | D | 0.898 | deleterious | None | None | None | None | N |
L/E | 0.9987 | likely_pathogenic | 0.9978 | pathogenic | -2.796 | Highly Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
L/F | 0.5983 | likely_pathogenic | 0.4127 | ambiguous | -1.45 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
L/G | 0.9959 | likely_pathogenic | 0.9924 | pathogenic | -2.878 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/H | 0.9933 | likely_pathogenic | 0.9867 | pathogenic | -2.809 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/I | 0.2191 | likely_benign | 0.1999 | benign | -0.546 | Destabilizing | 0.289 | N | 0.415 | neutral | None | None | None | None | N |
L/K | 0.9963 | likely_pathogenic | 0.9939 | pathogenic | -1.811 | Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
L/M | 0.3845 | ambiguous | 0.3262 | benign | -0.688 | Destabilizing | 0.993 | D | 0.774 | deleterious | D | 0.531422217 | None | None | N |
L/N | 0.9985 | likely_pathogenic | 0.9971 | pathogenic | -2.611 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
L/P | 0.9982 | likely_pathogenic | 0.9968 | pathogenic | -1.123 | Destabilizing | 0.999 | D | 0.897 | deleterious | D | 0.562403715 | None | None | N |
L/Q | 0.9922 | likely_pathogenic | 0.9873 | pathogenic | -2.176 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.562403715 | None | None | N |
L/R | 0.9913 | likely_pathogenic | 0.9859 | pathogenic | -2.106 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | D | 0.562403715 | None | None | N |
L/S | 0.9972 | likely_pathogenic | 0.9948 | pathogenic | -3.032 | Highly Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
L/T | 0.9872 | likely_pathogenic | 0.9795 | pathogenic | -2.542 | Highly Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
L/V | 0.3216 | likely_benign | 0.2782 | benign | -1.123 | Destabilizing | 0.898 | D | 0.705 | prob.neutral | N | 0.517179076 | None | None | N |
L/W | 0.9662 | likely_pathogenic | 0.9299 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/Y | 0.9682 | likely_pathogenic | 0.9247 | pathogenic | -1.607 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.