Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21528 | 64807;64808;64809 | chr2:178585162;178585161;178585160 | chr2:179449889;179449888;179449887 |
N2AB | 19887 | 59884;59885;59886 | chr2:178585162;178585161;178585160 | chr2:179449889;179449888;179449887 |
N2A | 18960 | 57103;57104;57105 | chr2:178585162;178585161;178585160 | chr2:179449889;179449888;179449887 |
N2B | 12463 | 37612;37613;37614 | chr2:178585162;178585161;178585160 | chr2:179449889;179449888;179449887 |
Novex-1 | 12588 | 37987;37988;37989 | chr2:178585162;178585161;178585160 | chr2:179449889;179449888;179449887 |
Novex-2 | 12655 | 38188;38189;38190 | chr2:178585162;178585161;178585160 | chr2:179449889;179449888;179449887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs2048653243 | None | 0.733 | N | 0.263 | 0.234 | 0.107399877778 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs2048653243 | None | 0.733 | N | 0.263 | 0.234 | 0.107399877778 | gnomAD-4.0.0 | 5.12722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57887E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4157 | ambiguous | 0.358 | ambiguous | -0.383 | Destabilizing | 0.994 | D | 0.551 | neutral | N | 0.489014326 | None | None | N |
D/C | 0.8926 | likely_pathogenic | 0.8443 | pathogenic | -0.026 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
D/E | 0.2345 | likely_benign | 0.2057 | benign | -0.532 | Destabilizing | 0.989 | D | 0.382 | neutral | N | 0.471177926 | None | None | N |
D/F | 0.8538 | likely_pathogenic | 0.8191 | pathogenic | -0.358 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/G | 0.3029 | likely_benign | 0.2648 | benign | -0.641 | Destabilizing | 0.989 | D | 0.463 | neutral | N | 0.473140796 | None | None | N |
D/H | 0.5736 | likely_pathogenic | 0.4927 | ambiguous | -0.563 | Destabilizing | 0.595 | D | 0.362 | neutral | N | 0.48253107 | None | None | N |
D/I | 0.8012 | likely_pathogenic | 0.7485 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
D/K | 0.7135 | likely_pathogenic | 0.649 | pathogenic | -0.178 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | N |
D/L | 0.7705 | likely_pathogenic | 0.7195 | pathogenic | 0.266 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/M | 0.8583 | likely_pathogenic | 0.8131 | pathogenic | 0.609 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/N | 0.148 | likely_benign | 0.1363 | benign | -0.392 | Destabilizing | 0.733 | D | 0.263 | neutral | N | 0.411761476 | None | None | N |
D/P | 0.9644 | likely_pathogenic | 0.9448 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
D/Q | 0.6301 | likely_pathogenic | 0.5616 | ambiguous | -0.325 | Destabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | N |
D/R | 0.7554 | likely_pathogenic | 0.69 | pathogenic | -0.056 | Destabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
D/S | 0.3016 | likely_benign | 0.254 | benign | -0.563 | Destabilizing | 0.992 | D | 0.431 | neutral | None | None | None | None | N |
D/T | 0.5309 | ambiguous | 0.4495 | ambiguous | -0.37 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
D/V | 0.5926 | likely_pathogenic | 0.5264 | ambiguous | 0.074 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.466380537 | None | None | N |
D/W | 0.962 | likely_pathogenic | 0.9436 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/Y | 0.4486 | ambiguous | 0.3888 | ambiguous | -0.161 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | N | 0.461354108 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.