Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21530 | 64813;64814;64815 | chr2:178585156;178585155;178585154 | chr2:179449883;179449882;179449881 |
N2AB | 19889 | 59890;59891;59892 | chr2:178585156;178585155;178585154 | chr2:179449883;179449882;179449881 |
N2A | 18962 | 57109;57110;57111 | chr2:178585156;178585155;178585154 | chr2:179449883;179449882;179449881 |
N2B | 12465 | 37618;37619;37620 | chr2:178585156;178585155;178585154 | chr2:179449883;179449882;179449881 |
Novex-1 | 12590 | 37993;37994;37995 | chr2:178585156;178585155;178585154 | chr2:179449883;179449882;179449881 |
Novex-2 | 12657 | 38194;38195;38196 | chr2:178585156;178585155;178585154 | chr2:179449883;179449882;179449881 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.188 | N | 0.402 | 0.125 | 0.236890367714 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.084 | likely_benign | 0.0822 | benign | -0.788 | Destabilizing | None | N | 0.227 | neutral | N | 0.509315893 | None | None | N |
T/C | 0.2563 | likely_benign | 0.2443 | benign | -0.313 | Destabilizing | 0.824 | D | 0.425 | neutral | None | None | None | None | N |
T/D | 0.347 | ambiguous | 0.3263 | benign | -0.615 | Destabilizing | 0.081 | N | 0.393 | neutral | None | None | None | None | N |
T/E | 0.2687 | likely_benign | 0.2684 | benign | -0.605 | Destabilizing | 0.081 | N | 0.397 | neutral | None | None | None | None | N |
T/F | 0.2352 | likely_benign | 0.2418 | benign | -0.832 | Destabilizing | 0.38 | N | 0.497 | neutral | None | None | None | None | N |
T/G | 0.1659 | likely_benign | 0.1483 | benign | -1.07 | Destabilizing | 0.081 | N | 0.449 | neutral | None | None | None | None | N |
T/H | 0.2104 | likely_benign | 0.2174 | benign | -1.422 | Destabilizing | 0.824 | D | 0.465 | neutral | None | None | None | None | N |
T/I | 0.1787 | likely_benign | 0.1858 | benign | -0.119 | Destabilizing | 0.188 | N | 0.398 | neutral | D | 0.534771698 | None | None | N |
T/K | 0.1638 | likely_benign | 0.1685 | benign | -0.835 | Destabilizing | 0.002 | N | 0.288 | neutral | None | None | None | None | N |
T/L | 0.0819 | likely_benign | 0.083 | benign | -0.119 | Destabilizing | 0.035 | N | 0.408 | neutral | None | None | None | None | N |
T/M | 0.0851 | likely_benign | 0.0896 | benign | 0.353 | Stabilizing | 0.035 | N | 0.443 | neutral | None | None | None | None | N |
T/N | 0.0995 | likely_benign | 0.0999 | benign | -0.81 | Destabilizing | 0.188 | N | 0.402 | neutral | N | 0.508238457 | None | None | N |
T/P | 0.3616 | ambiguous | 0.3604 | ambiguous | -0.309 | Destabilizing | 0.317 | N | 0.407 | neutral | N | 0.518586838 | None | None | N |
T/Q | 0.1654 | likely_benign | 0.1737 | benign | -0.957 | Destabilizing | 0.38 | N | 0.43 | neutral | None | None | None | None | N |
T/R | 0.166 | likely_benign | 0.1742 | benign | -0.612 | Destabilizing | 0.235 | N | 0.394 | neutral | None | None | None | None | N |
T/S | 0.0777 | likely_benign | 0.0747 | benign | -1.019 | Destabilizing | None | N | 0.303 | neutral | N | 0.462274094 | None | None | N |
T/V | 0.1243 | likely_benign | 0.1267 | benign | -0.309 | Destabilizing | 0.081 | N | 0.366 | neutral | None | None | None | None | N |
T/W | 0.5872 | likely_pathogenic | 0.5869 | pathogenic | -0.824 | Destabilizing | 0.935 | D | 0.567 | neutral | None | None | None | None | N |
T/Y | 0.2895 | likely_benign | 0.2767 | benign | -0.589 | Destabilizing | 0.555 | D | 0.491 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.