Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21532 | 64819;64820;64821 | chr2:178585150;178585149;178585148 | chr2:179449877;179449876;179449875 |
N2AB | 19891 | 59896;59897;59898 | chr2:178585150;178585149;178585148 | chr2:179449877;179449876;179449875 |
N2A | 18964 | 57115;57116;57117 | chr2:178585150;178585149;178585148 | chr2:179449877;179449876;179449875 |
N2B | 12467 | 37624;37625;37626 | chr2:178585150;178585149;178585148 | chr2:179449877;179449876;179449875 |
Novex-1 | 12592 | 37999;38000;38001 | chr2:178585150;178585149;178585148 | chr2:179449877;179449876;179449875 |
Novex-2 | 12659 | 38200;38201;38202 | chr2:178585150;178585149;178585148 | chr2:179449877;179449876;179449875 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs794729477 | 0.079 | 0.99 | N | 0.525 | 0.259 | 0.1749357433 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
K/E | rs794729477 | 0.079 | 0.99 | N | 0.525 | 0.259 | 0.1749357433 | gnomAD-4.0.0 | 9.55338E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7163E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2775 | likely_benign | 0.2154 | benign | 0.077 | Stabilizing | 0.469 | N | 0.309 | neutral | None | None | None | None | I |
K/C | 0.6883 | likely_pathogenic | 0.6078 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
K/D | 0.4492 | ambiguous | 0.3709 | ambiguous | -0.032 | Destabilizing | 0.998 | D | 0.479 | neutral | None | None | None | None | I |
K/E | 0.1671 | likely_benign | 0.1305 | benign | -0.046 | Destabilizing | 0.99 | D | 0.525 | neutral | N | 0.413702917 | None | None | I |
K/F | 0.7928 | likely_pathogenic | 0.7157 | pathogenic | -0.265 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | I |
K/G | 0.3708 | ambiguous | 0.2956 | benign | -0.071 | Destabilizing | 0.985 | D | 0.493 | neutral | None | None | None | None | I |
K/H | 0.3338 | likely_benign | 0.2851 | benign | -0.318 | Destabilizing | 1.0 | D | 0.517 | neutral | None | None | None | None | I |
K/I | 0.4188 | ambiguous | 0.3399 | benign | 0.381 | Stabilizing | 0.994 | D | 0.617 | neutral | N | 0.504847783 | None | None | I |
K/L | 0.3754 | ambiguous | 0.2992 | benign | 0.381 | Stabilizing | 0.985 | D | 0.487 | neutral | None | None | None | None | I |
K/M | 0.2456 | likely_benign | 0.1918 | benign | 0.193 | Stabilizing | 1.0 | D | 0.513 | neutral | None | None | None | None | I |
K/N | 0.3677 | ambiguous | 0.2933 | benign | 0.342 | Stabilizing | 0.997 | D | 0.511 | neutral | N | 0.461267577 | None | None | I |
K/P | 0.7399 | likely_pathogenic | 0.6774 | pathogenic | 0.305 | Stabilizing | 0.998 | D | 0.52 | neutral | None | None | None | None | I |
K/Q | 0.1305 | likely_benign | 0.1126 | benign | 0.164 | Stabilizing | 0.999 | D | 0.551 | neutral | N | 0.434851767 | None | None | I |
K/R | 0.0922 | likely_benign | 0.0877 | benign | 0.073 | Stabilizing | 0.99 | D | 0.504 | neutral | N | 0.472023288 | None | None | I |
K/S | 0.3393 | likely_benign | 0.2574 | benign | -0.078 | Destabilizing | 0.971 | D | 0.496 | neutral | None | None | None | None | I |
K/T | 0.17 | likely_benign | 0.1298 | benign | 0.036 | Stabilizing | 0.4 | N | 0.351 | neutral | N | 0.441681739 | None | None | I |
K/V | 0.3665 | ambiguous | 0.2885 | benign | 0.305 | Stabilizing | 0.985 | D | 0.472 | neutral | None | None | None | None | I |
K/W | 0.7636 | likely_pathogenic | 0.6997 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
K/Y | 0.6662 | likely_pathogenic | 0.5857 | pathogenic | 0.032 | Stabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.