Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21537 | 64834;64835;64836 | chr2:178585135;178585134;178585133 | chr2:179449862;179449861;179449860 |
N2AB | 19896 | 59911;59912;59913 | chr2:178585135;178585134;178585133 | chr2:179449862;179449861;179449860 |
N2A | 18969 | 57130;57131;57132 | chr2:178585135;178585134;178585133 | chr2:179449862;179449861;179449860 |
N2B | 12472 | 37639;37640;37641 | chr2:178585135;178585134;178585133 | chr2:179449862;179449861;179449860 |
Novex-1 | 12597 | 38014;38015;38016 | chr2:178585135;178585134;178585133 | chr2:179449862;179449861;179449860 |
Novex-2 | 12664 | 38215;38216;38217 | chr2:178585135;178585134;178585133 | chr2:179449862;179449861;179449860 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.788 | 0.818 | 0.713973972888 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9957 | likely_pathogenic | 0.9942 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Y/C | 0.9083 | likely_pathogenic | 0.8803 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.637404035 | None | None | N |
Y/D | 0.9966 | likely_pathogenic | 0.9953 | pathogenic | -2.166 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.637404035 | None | None | N |
Y/E | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -1.914 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/F | 0.1416 | likely_benign | 0.1404 | benign | -0.369 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | D | 0.581554153 | None | None | N |
Y/G | 0.9919 | likely_pathogenic | 0.9896 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/H | 0.9381 | likely_pathogenic | 0.9182 | pathogenic | -1.598 | Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.63720223 | None | None | N |
Y/I | 0.9174 | likely_pathogenic | 0.8981 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Y/K | 0.9982 | likely_pathogenic | 0.9973 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Y/L | 0.8594 | likely_pathogenic | 0.8399 | pathogenic | -0.259 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
Y/M | 0.9792 | likely_pathogenic | 0.9741 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
Y/N | 0.9862 | likely_pathogenic | 0.9807 | pathogenic | -2.306 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.637404035 | None | None | N |
Y/P | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Y/Q | 0.9973 | likely_pathogenic | 0.996 | pathogenic | -1.813 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Y/R | 0.9909 | likely_pathogenic | 0.9874 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/S | 0.9864 | likely_pathogenic | 0.9821 | pathogenic | -2.671 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.637404035 | None | None | N |
Y/T | 0.9942 | likely_pathogenic | 0.9919 | pathogenic | -2.268 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/V | 0.9025 | likely_pathogenic | 0.8818 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
Y/W | 0.6986 | likely_pathogenic | 0.6921 | pathogenic | 0.221 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.