Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21539 | 64840;64841;64842 | chr2:178585129;178585128;178585127 | chr2:179449856;179449855;179449854 |
N2AB | 19898 | 59917;59918;59919 | chr2:178585129;178585128;178585127 | chr2:179449856;179449855;179449854 |
N2A | 18971 | 57136;57137;57138 | chr2:178585129;178585128;178585127 | chr2:179449856;179449855;179449854 |
N2B | 12474 | 37645;37646;37647 | chr2:178585129;178585128;178585127 | chr2:179449856;179449855;179449854 |
Novex-1 | 12599 | 38020;38021;38022 | chr2:178585129;178585128;178585127 | chr2:179449856;179449855;179449854 |
Novex-2 | 12666 | 38221;38222;38223 | chr2:178585129;178585128;178585127 | chr2:179449856;179449855;179449854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1060500431 | None | 1.0 | N | 0.843 | 0.399 | 0.557597400255 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1060500431 | None | 1.0 | N | 0.843 | 0.399 | 0.557597400255 | gnomAD-4.0.0 | 2.56433E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79069E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9148 | likely_pathogenic | 0.8932 | pathogenic | -2.689 | Highly Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
L/C | 0.8508 | likely_pathogenic | 0.833 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -3.22 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/E | 0.9957 | likely_pathogenic | 0.9947 | pathogenic | -3.002 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/F | 0.6394 | likely_pathogenic | 0.62 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.512832548 | None | None | N |
L/G | 0.9913 | likely_pathogenic | 0.9881 | pathogenic | -3.214 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/H | 0.99 | likely_pathogenic | 0.988 | pathogenic | -2.608 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.484053492 | None | None | N |
L/I | 0.1056 | likely_benign | 0.102 | benign | -1.16 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.432696896 | None | None | N |
L/K | 0.9921 | likely_pathogenic | 0.9914 | pathogenic | -1.941 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/M | 0.2629 | likely_benign | 0.2518 | benign | -1.296 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/N | 0.9957 | likely_pathogenic | 0.9944 | pathogenic | -2.329 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/P | 0.9963 | likely_pathogenic | 0.9962 | pathogenic | -1.654 | Destabilizing | 1.0 | D | 0.904 | deleterious | N | 0.484053492 | None | None | N |
L/Q | 0.9799 | likely_pathogenic | 0.976 | pathogenic | -2.208 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/R | 0.9852 | likely_pathogenic | 0.984 | pathogenic | -1.654 | Destabilizing | 1.0 | D | 0.9 | deleterious | N | 0.484053492 | None | None | N |
L/S | 0.9909 | likely_pathogenic | 0.988 | pathogenic | -2.992 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/T | 0.9557 | likely_pathogenic | 0.9418 | pathogenic | -2.635 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/V | 0.1267 | likely_benign | 0.121 | benign | -1.654 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.460286142 | None | None | N |
L/W | 0.9716 | likely_pathogenic | 0.9703 | pathogenic | -1.952 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
L/Y | 0.966 | likely_pathogenic | 0.9629 | pathogenic | -1.724 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.