Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21544 | 64855;64856;64857 | chr2:178585114;178585113;178585112 | chr2:179449841;179449840;179449839 |
N2AB | 19903 | 59932;59933;59934 | chr2:178585114;178585113;178585112 | chr2:179449841;179449840;179449839 |
N2A | 18976 | 57151;57152;57153 | chr2:178585114;178585113;178585112 | chr2:179449841;179449840;179449839 |
N2B | 12479 | 37660;37661;37662 | chr2:178585114;178585113;178585112 | chr2:179449841;179449840;179449839 |
Novex-1 | 12604 | 38035;38036;38037 | chr2:178585114;178585113;178585112 | chr2:179449841;179449840;179449839 |
Novex-2 | 12671 | 38236;38237;38238 | chr2:178585114;178585113;178585112 | chr2:179449841;179449840;179449839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1231941272 | 0.179 | 0.999 | D | 0.478 | 0.352 | 0.437207349437 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
S/N | rs1231941272 | 0.179 | 0.999 | D | 0.478 | 0.352 | 0.437207349437 | gnomAD-4.0.0 | 1.5953E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86572E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0712 | likely_benign | 0.0735 | benign | -0.262 | Destabilizing | 0.998 | D | 0.398 | neutral | None | None | None | None | I |
S/C | 0.1305 | likely_benign | 0.1381 | benign | -0.4 | Destabilizing | 1.0 | D | 0.607 | neutral | N | 0.509400261 | None | None | I |
S/D | 0.4901 | ambiguous | 0.4557 | ambiguous | -0.138 | Destabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | I |
S/E | 0.5426 | ambiguous | 0.5222 | ambiguous | -0.25 | Destabilizing | 0.999 | D | 0.484 | neutral | None | None | None | None | I |
S/F | 0.256 | likely_benign | 0.2519 | benign | -1.039 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
S/G | 0.0987 | likely_benign | 0.1019 | benign | -0.27 | Destabilizing | 0.999 | D | 0.345 | neutral | N | 0.521498543 | None | None | I |
S/H | 0.3989 | ambiguous | 0.3736 | ambiguous | -0.617 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
S/I | 0.1037 | likely_benign | 0.1016 | benign | -0.362 | Destabilizing | 1.0 | D | 0.64 | neutral | N | 0.514207211 | None | None | I |
S/K | 0.6579 | likely_pathogenic | 0.6036 | pathogenic | -0.407 | Destabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | I |
S/L | 0.0895 | likely_benign | 0.0902 | benign | -0.362 | Destabilizing | 1.0 | D | 0.539 | neutral | None | None | None | None | I |
S/M | 0.1617 | likely_benign | 0.1606 | benign | -0.224 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
S/N | 0.1537 | likely_benign | 0.132 | benign | -0.183 | Destabilizing | 0.999 | D | 0.478 | neutral | D | 0.53631328 | None | None | I |
S/P | 0.2021 | likely_benign | 0.2068 | benign | -0.309 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | I |
S/Q | 0.4814 | ambiguous | 0.4482 | ambiguous | -0.409 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | I |
S/R | 0.603 | likely_pathogenic | 0.5708 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.579 | neutral | N | 0.520978468 | None | None | I |
S/T | 0.0687 | likely_benign | 0.0708 | benign | -0.3 | Destabilizing | 0.999 | D | 0.337 | neutral | D | 0.528597874 | None | None | I |
S/V | 0.121 | likely_benign | 0.1224 | benign | -0.309 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
S/W | 0.513 | ambiguous | 0.5402 | ambiguous | -1.122 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
S/Y | 0.2766 | likely_benign | 0.2811 | benign | -0.82 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.