Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21554 | 64885;64886;64887 | chr2:178585084;178585083;178585082 | chr2:179449811;179449810;179449809 |
N2AB | 19913 | 59962;59963;59964 | chr2:178585084;178585083;178585082 | chr2:179449811;179449810;179449809 |
N2A | 18986 | 57181;57182;57183 | chr2:178585084;178585083;178585082 | chr2:179449811;179449810;179449809 |
N2B | 12489 | 37690;37691;37692 | chr2:178585084;178585083;178585082 | chr2:179449811;179449810;179449809 |
Novex-1 | 12614 | 38065;38066;38067 | chr2:178585084;178585083;178585082 | chr2:179449811;179449810;179449809 |
Novex-2 | 12681 | 38266;38267;38268 | chr2:178585084;178585083;178585082 | chr2:179449811;179449810;179449809 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.781 | N | 0.854 | 0.481 | 0.750149104527 | gnomAD-4.0.0 | 3.22615E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.93617E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7916 | likely_pathogenic | 0.8364 | pathogenic | -2.101 | Highly Destabilizing | 0.334 | N | 0.572 | neutral | N | 0.504683097 | None | None | N |
V/C | 0.9536 | likely_pathogenic | 0.9582 | pathogenic | -1.484 | Destabilizing | 0.982 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.996 | likely_pathogenic | 0.9974 | pathogenic | -2.921 | Highly Destabilizing | 0.781 | D | 0.86 | deleterious | N | 0.505190076 | None | None | N |
V/E | 0.9907 | likely_pathogenic | 0.9936 | pathogenic | -2.614 | Highly Destabilizing | 0.826 | D | 0.847 | deleterious | None | None | None | None | N |
V/F | 0.6761 | likely_pathogenic | 0.697 | pathogenic | -1.196 | Destabilizing | 0.638 | D | 0.819 | deleterious | N | 0.503922628 | None | None | N |
V/G | 0.9235 | likely_pathogenic | 0.9428 | pathogenic | -2.715 | Highly Destabilizing | 0.781 | D | 0.854 | deleterious | N | 0.49383377 | None | None | N |
V/H | 0.9962 | likely_pathogenic | 0.9974 | pathogenic | -2.655 | Highly Destabilizing | 0.982 | D | 0.84 | deleterious | None | None | None | None | N |
V/I | 0.0812 | likely_benign | 0.0787 | benign | -0.331 | Destabilizing | 0.002 | N | 0.213 | neutral | N | 0.465004102 | None | None | N |
V/K | 0.9939 | likely_pathogenic | 0.9957 | pathogenic | -1.687 | Destabilizing | 0.826 | D | 0.848 | deleterious | None | None | None | None | N |
V/L | 0.4054 | ambiguous | 0.4401 | ambiguous | -0.331 | Destabilizing | 0.034 | N | 0.555 | neutral | N | 0.426082276 | None | None | N |
V/M | 0.4696 | ambiguous | 0.5155 | ambiguous | -0.476 | Destabilizing | 0.7 | D | 0.746 | deleterious | None | None | None | None | N |
V/N | 0.9881 | likely_pathogenic | 0.9913 | pathogenic | -2.304 | Highly Destabilizing | 0.935 | D | 0.868 | deleterious | None | None | None | None | N |
V/P | 0.9887 | likely_pathogenic | 0.9928 | pathogenic | -0.899 | Destabilizing | 0.935 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.9917 | likely_pathogenic | 0.9942 | pathogenic | -1.96 | Destabilizing | 0.935 | D | 0.853 | deleterious | None | None | None | None | N |
V/R | 0.9906 | likely_pathogenic | 0.9932 | pathogenic | -1.79 | Destabilizing | 0.826 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.9669 | likely_pathogenic | 0.976 | pathogenic | -2.867 | Highly Destabilizing | 0.826 | D | 0.84 | deleterious | None | None | None | None | N |
V/T | 0.8554 | likely_pathogenic | 0.885 | pathogenic | -2.395 | Highly Destabilizing | 0.399 | N | 0.677 | prob.neutral | None | None | None | None | N |
V/W | 0.9927 | likely_pathogenic | 0.9944 | pathogenic | -1.808 | Destabilizing | 0.982 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9711 | likely_pathogenic | 0.9761 | pathogenic | -1.402 | Destabilizing | 0.826 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.