Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21555 | 64888;64889;64890 | chr2:178585081;178585080;178585079 | chr2:179449808;179449807;179449806 |
N2AB | 19914 | 59965;59966;59967 | chr2:178585081;178585080;178585079 | chr2:179449808;179449807;179449806 |
N2A | 18987 | 57184;57185;57186 | chr2:178585081;178585080;178585079 | chr2:179449808;179449807;179449806 |
N2B | 12490 | 37693;37694;37695 | chr2:178585081;178585080;178585079 | chr2:179449808;179449807;179449806 |
Novex-1 | 12615 | 38068;38069;38070 | chr2:178585081;178585080;178585079 | chr2:179449808;179449807;179449806 |
Novex-2 | 12682 | 38269;38270;38271 | chr2:178585081;178585080;178585079 | chr2:179449808;179449807;179449806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs756320940 | -0.905 | 0.027 | N | 0.311 | 0.098 | 0.343560092441 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.03E-06 | 0 |
V/A | rs756320940 | -0.905 | 0.027 | N | 0.311 | 0.098 | 0.343560092441 | gnomAD-4.0.0 | 1.37635E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80548E-06 | 0 | 0 |
V/L | None | None | 0.004 | N | 0.245 | 0.125 | 0.275215494804 | gnomAD-4.0.0 | 1.61303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89198E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1732 | likely_benign | 0.1787 | benign | -1.349 | Destabilizing | 0.027 | N | 0.311 | neutral | N | 0.50712095 | None | None | N |
V/C | 0.6302 | likely_pathogenic | 0.6329 | pathogenic | -0.911 | Destabilizing | 0.824 | D | 0.431 | neutral | None | None | None | None | N |
V/D | 0.4467 | ambiguous | 0.4397 | ambiguous | -1.046 | Destabilizing | 0.38 | N | 0.548 | neutral | None | None | None | None | N |
V/E | 0.3897 | ambiguous | 0.3818 | ambiguous | -1.075 | Destabilizing | 0.117 | N | 0.509 | neutral | N | 0.452190387 | None | None | N |
V/F | 0.162 | likely_benign | 0.1535 | benign | -1.079 | Destabilizing | 0.38 | N | 0.465 | neutral | None | None | None | None | N |
V/G | 0.3482 | ambiguous | 0.3552 | ambiguous | -1.638 | Destabilizing | 0.117 | N | 0.567 | neutral | D | 0.522245118 | None | None | N |
V/H | 0.4367 | ambiguous | 0.4427 | ambiguous | -1.115 | Destabilizing | 0.935 | D | 0.524 | neutral | None | None | None | None | N |
V/I | 0.0581 | likely_benign | 0.0577 | benign | -0.669 | Destabilizing | None | N | 0.09 | neutral | N | 0.419811396 | None | None | N |
V/K | 0.4106 | ambiguous | 0.4045 | ambiguous | -1.096 | Destabilizing | 0.149 | N | 0.507 | neutral | None | None | None | None | N |
V/L | 0.1337 | likely_benign | 0.1336 | benign | -0.669 | Destabilizing | 0.004 | N | 0.245 | neutral | N | 0.482572009 | None | None | N |
V/M | 0.0984 | likely_benign | 0.1007 | benign | -0.494 | Destabilizing | 0.38 | N | 0.411 | neutral | None | None | None | None | N |
V/N | 0.1905 | likely_benign | 0.1962 | benign | -0.829 | Destabilizing | 0.38 | N | 0.546 | neutral | None | None | None | None | N |
V/P | 0.9282 | likely_pathogenic | 0.9468 | pathogenic | -0.86 | Destabilizing | 0.555 | D | 0.519 | neutral | None | None | None | None | N |
V/Q | 0.3144 | likely_benign | 0.3176 | benign | -1.041 | Destabilizing | 0.555 | D | 0.532 | neutral | None | None | None | None | N |
V/R | 0.3568 | ambiguous | 0.358 | ambiguous | -0.54 | Destabilizing | 0.38 | N | 0.567 | neutral | None | None | None | None | N |
V/S | 0.1781 | likely_benign | 0.1851 | benign | -1.357 | Destabilizing | 0.081 | N | 0.501 | neutral | None | None | None | None | N |
V/T | 0.0986 | likely_benign | 0.0976 | benign | -1.28 | Destabilizing | None | N | 0.076 | neutral | None | None | None | None | N |
V/W | 0.7393 | likely_pathogenic | 0.7499 | pathogenic | -1.211 | Destabilizing | 0.935 | D | 0.576 | neutral | None | None | None | None | N |
V/Y | 0.4602 | ambiguous | 0.4573 | ambiguous | -0.939 | Destabilizing | 0.555 | D | 0.466 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.