Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21564 | 64915;64916;64917 | chr2:178584951;178584950;178584949 | chr2:179449678;179449677;179449676 |
N2AB | 19923 | 59992;59993;59994 | chr2:178584951;178584950;178584949 | chr2:179449678;179449677;179449676 |
N2A | 18996 | 57211;57212;57213 | chr2:178584951;178584950;178584949 | chr2:179449678;179449677;179449676 |
N2B | 12499 | 37720;37721;37722 | chr2:178584951;178584950;178584949 | chr2:179449678;179449677;179449676 |
Novex-1 | 12624 | 38095;38096;38097 | chr2:178584951;178584950;178584949 | chr2:179449678;179449677;179449676 |
Novex-2 | 12691 | 38296;38297;38298 | chr2:178584951;178584950;178584949 | chr2:179449678;179449677;179449676 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.801 | N | 0.468 | 0.193 | 0.323886383625 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2739 | likely_benign | 0.2491 | benign | -0.657 | Destabilizing | 0.688 | D | 0.426 | neutral | None | None | None | None | N |
Q/C | 0.6526 | likely_pathogenic | 0.6002 | pathogenic | -0.158 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
Q/D | 0.6783 | likely_pathogenic | 0.6414 | pathogenic | -1.289 | Destabilizing | 0.525 | D | 0.433 | neutral | None | None | None | None | N |
Q/E | 0.108 | likely_benign | 0.0958 | benign | -1.095 | Destabilizing | 0.002 | N | 0.095 | neutral | N | 0.39798689 | None | None | N |
Q/F | 0.7769 | likely_pathogenic | 0.7331 | pathogenic | -0.043 | Destabilizing | 0.991 | D | 0.543 | neutral | None | None | None | None | N |
Q/G | 0.3621 | ambiguous | 0.3084 | benign | -1.082 | Destabilizing | 0.915 | D | 0.465 | neutral | None | None | None | None | N |
Q/H | 0.3973 | ambiguous | 0.375 | ambiguous | -1.053 | Destabilizing | 0.966 | D | 0.456 | neutral | N | 0.498575171 | None | None | N |
Q/I | 0.4113 | ambiguous | 0.3814 | ambiguous | 0.478 | Stabilizing | 0.974 | D | 0.551 | neutral | None | None | None | None | N |
Q/K | 0.1324 | likely_benign | 0.1219 | benign | -0.887 | Destabilizing | 0.454 | N | 0.453 | neutral | N | 0.460112784 | None | None | N |
Q/L | 0.1588 | likely_benign | 0.1475 | benign | 0.478 | Stabilizing | 0.801 | D | 0.468 | neutral | N | 0.489222182 | None | None | N |
Q/M | 0.374 | ambiguous | 0.3438 | ambiguous | 0.745 | Stabilizing | 0.991 | D | 0.455 | neutral | None | None | None | None | N |
Q/N | 0.4963 | ambiguous | 0.4438 | ambiguous | -1.459 | Destabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
Q/P | 0.6532 | likely_pathogenic | 0.6881 | pathogenic | 0.128 | Stabilizing | 0.891 | D | 0.486 | neutral | N | 0.455247587 | None | None | N |
Q/R | 0.1544 | likely_benign | 0.1502 | benign | -1.078 | Destabilizing | 0.801 | D | 0.364 | neutral | N | 0.481816207 | None | None | N |
Q/S | 0.3485 | ambiguous | 0.3145 | benign | -1.534 | Destabilizing | 0.688 | D | 0.4 | neutral | None | None | None | None | N |
Q/T | 0.2926 | likely_benign | 0.2732 | benign | -1.168 | Destabilizing | 0.842 | D | 0.395 | neutral | None | None | None | None | N |
Q/V | 0.2426 | likely_benign | 0.2311 | benign | 0.128 | Stabilizing | 0.915 | D | 0.497 | neutral | None | None | None | None | N |
Q/W | 0.7735 | likely_pathogenic | 0.7756 | pathogenic | -0.183 | Destabilizing | 0.998 | D | 0.58 | neutral | None | None | None | None | N |
Q/Y | 0.5962 | likely_pathogenic | 0.5602 | ambiguous | 0.116 | Stabilizing | 0.991 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.