Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21569 | 64930;64931;64932 | chr2:178584936;178584935;178584934 | chr2:179449663;179449662;179449661 |
N2AB | 19928 | 60007;60008;60009 | chr2:178584936;178584935;178584934 | chr2:179449663;179449662;179449661 |
N2A | 19001 | 57226;57227;57228 | chr2:178584936;178584935;178584934 | chr2:179449663;179449662;179449661 |
N2B | 12504 | 37735;37736;37737 | chr2:178584936;178584935;178584934 | chr2:179449663;179449662;179449661 |
Novex-1 | 12629 | 38110;38111;38112 | chr2:178584936;178584935;178584934 | chr2:179449663;179449662;179449661 |
Novex-2 | 12696 | 38311;38312;38313 | chr2:178584936;178584935;178584934 | chr2:179449663;179449662;179449661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.4 | N | 0.235 | 0.071 | 0.446111551642 | gnomAD-4.0.0 | 1.59246E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7442 | likely_pathogenic | 0.7405 | pathogenic | -2.302 | Highly Destabilizing | 0.985 | D | 0.58 | neutral | None | None | None | None | I |
I/C | 0.8338 | likely_pathogenic | 0.8113 | pathogenic | -1.773 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
I/D | 0.9727 | likely_pathogenic | 0.9773 | pathogenic | -1.597 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
I/E | 0.9516 | likely_pathogenic | 0.9586 | pathogenic | -1.462 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
I/F | 0.2379 | likely_benign | 0.2305 | benign | -1.495 | Destabilizing | 0.265 | N | 0.401 | neutral | N | 0.452197882 | None | None | I |
I/G | 0.9472 | likely_pathogenic | 0.9462 | pathogenic | -2.778 | Highly Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
I/H | 0.8993 | likely_pathogenic | 0.9115 | pathogenic | -2.03 | Highly Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
I/K | 0.8773 | likely_pathogenic | 0.8999 | pathogenic | -1.588 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
I/L | 0.1896 | likely_benign | 0.1748 | benign | -0.985 | Destabilizing | 0.817 | D | 0.452 | neutral | N | 0.468879488 | None | None | I |
I/M | 0.1981 | likely_benign | 0.1988 | benign | -0.945 | Destabilizing | 0.997 | D | 0.599 | neutral | N | 0.485829416 | None | None | I |
I/N | 0.7846 | likely_pathogenic | 0.7983 | pathogenic | -1.618 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | N | 0.50946708 | None | None | I |
I/P | 0.9384 | likely_pathogenic | 0.9423 | pathogenic | -1.398 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
I/Q | 0.8979 | likely_pathogenic | 0.9121 | pathogenic | -1.604 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
I/R | 0.8145 | likely_pathogenic | 0.8441 | pathogenic | -1.21 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/S | 0.7792 | likely_pathogenic | 0.7921 | pathogenic | -2.447 | Highly Destabilizing | 0.997 | D | 0.676 | prob.neutral | N | 0.483854407 | None | None | I |
I/T | 0.6672 | likely_pathogenic | 0.687 | pathogenic | -2.16 | Highly Destabilizing | 0.98 | D | 0.609 | neutral | N | 0.47949954 | None | None | I |
I/V | 0.105 | likely_benign | 0.099 | benign | -1.398 | Destabilizing | 0.4 | N | 0.235 | neutral | N | 0.457774273 | None | None | I |
I/W | 0.9296 | likely_pathogenic | 0.9298 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
I/Y | 0.7658 | likely_pathogenic | 0.7673 | pathogenic | -1.402 | Destabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.