Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21577 | 64954;64955;64956 | chr2:178584912;178584911;178584910 | chr2:179449639;179449638;179449637 |
N2AB | 19936 | 60031;60032;60033 | chr2:178584912;178584911;178584910 | chr2:179449639;179449638;179449637 |
N2A | 19009 | 57250;57251;57252 | chr2:178584912;178584911;178584910 | chr2:179449639;179449638;179449637 |
N2B | 12512 | 37759;37760;37761 | chr2:178584912;178584911;178584910 | chr2:179449639;179449638;179449637 |
Novex-1 | 12637 | 38134;38135;38136 | chr2:178584912;178584911;178584910 | chr2:179449639;179449638;179449637 |
Novex-2 | 12704 | 38335;38336;38337 | chr2:178584912;178584911;178584910 | chr2:179449639;179449638;179449637 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/W | None | None | 0.997 | N | 0.782 | 0.388 | 0.701073398044 | gnomAD-4.0.0 | 6.84407E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99637E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6137 | likely_pathogenic | 0.629 | pathogenic | -1.483 | Destabilizing | 0.559 | D | 0.531 | neutral | None | None | None | None | N |
C/D | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -1.463 | Destabilizing | 0.956 | D | 0.818 | deleterious | None | None | None | None | N |
C/E | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -1.244 | Destabilizing | 0.956 | D | 0.825 | deleterious | None | None | None | None | N |
C/F | 0.7905 | likely_pathogenic | 0.8124 | pathogenic | -1.219 | Destabilizing | 0.97 | D | 0.782 | deleterious | N | 0.500428972 | None | None | N |
C/G | 0.6874 | likely_pathogenic | 0.7087 | pathogenic | -1.822 | Destabilizing | 0.698 | D | 0.741 | deleterious | N | 0.487125501 | None | None | N |
C/H | 0.9956 | likely_pathogenic | 0.9964 | pathogenic | -2.236 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
C/I | 0.6387 | likely_pathogenic | 0.655 | pathogenic | -0.586 | Destabilizing | 0.978 | D | 0.793 | deleterious | None | None | None | None | N |
C/K | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -0.775 | Destabilizing | 0.956 | D | 0.811 | deleterious | None | None | None | None | N |
C/L | 0.6962 | likely_pathogenic | 0.7214 | pathogenic | -0.586 | Destabilizing | 0.86 | D | 0.695 | prob.neutral | None | None | None | None | N |
C/M | 0.846 | likely_pathogenic | 0.8693 | pathogenic | -0.126 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
C/N | 0.9932 | likely_pathogenic | 0.9946 | pathogenic | -1.395 | Destabilizing | 0.956 | D | 0.827 | deleterious | None | None | None | None | N |
C/P | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -0.861 | Destabilizing | 0.978 | D | 0.823 | deleterious | None | None | None | None | N |
C/Q | 0.9959 | likely_pathogenic | 0.9968 | pathogenic | -1.008 | Destabilizing | 0.956 | D | 0.825 | deleterious | None | None | None | None | N |
C/R | 0.9932 | likely_pathogenic | 0.9947 | pathogenic | -1.222 | Destabilizing | 0.942 | D | 0.82 | deleterious | N | 0.49864639 | None | None | N |
C/S | 0.8309 | likely_pathogenic | 0.8493 | pathogenic | -1.655 | Destabilizing | 0.058 | N | 0.452 | neutral | N | 0.468767756 | None | None | N |
C/T | 0.8652 | likely_pathogenic | 0.8758 | pathogenic | -1.239 | Destabilizing | 0.754 | D | 0.721 | prob.delet. | None | None | None | None | N |
C/V | 0.456 | ambiguous | 0.4657 | ambiguous | -0.861 | Destabilizing | 0.86 | D | 0.741 | deleterious | None | None | None | None | N |
C/W | 0.9889 | likely_pathogenic | 0.9901 | pathogenic | -1.585 | Destabilizing | 0.997 | D | 0.782 | deleterious | N | 0.475769195 | None | None | N |
C/Y | 0.9602 | likely_pathogenic | 0.9658 | pathogenic | -1.306 | Destabilizing | 0.99 | D | 0.797 | deleterious | N | 0.480288646 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.