Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21580 | 64963;64964;64965 | chr2:178584903;178584902;178584901 | chr2:179449630;179449629;179449628 |
N2AB | 19939 | 60040;60041;60042 | chr2:178584903;178584902;178584901 | chr2:179449630;179449629;179449628 |
N2A | 19012 | 57259;57260;57261 | chr2:178584903;178584902;178584901 | chr2:179449630;179449629;179449628 |
N2B | 12515 | 37768;37769;37770 | chr2:178584903;178584902;178584901 | chr2:179449630;179449629;179449628 |
Novex-1 | 12640 | 38143;38144;38145 | chr2:178584903;178584902;178584901 | chr2:179449630;179449629;179449628 |
Novex-2 | 12707 | 38344;38345;38346 | chr2:178584903;178584902;178584901 | chr2:179449630;179449629;179449628 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.002 | N | 0.359 | 0.244 | 0.585930602222 | gnomAD-4.0.0 | 6.84394E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0846 | likely_benign | 0.0797 | benign | -0.766 | Destabilizing | 0.002 | N | 0.138 | neutral | D | 0.524372985 | None | None | N |
S/C | 0.1241 | likely_benign | 0.1166 | benign | -0.515 | Destabilizing | 0.92 | D | 0.542 | neutral | None | None | None | None | N |
S/D | 0.4879 | ambiguous | 0.4859 | ambiguous | -1.166 | Destabilizing | 0.766 | D | 0.474 | neutral | None | None | None | None | N |
S/E | 0.4981 | ambiguous | 0.5207 | ambiguous | -0.984 | Destabilizing | 0.617 | D | 0.399 | neutral | None | None | None | None | N |
S/F | 0.1919 | likely_benign | 0.1697 | benign | -0.723 | Destabilizing | 0.85 | D | 0.587 | neutral | None | None | None | None | N |
S/G | 0.1578 | likely_benign | 0.1455 | benign | -1.162 | Destabilizing | 0.25 | N | 0.384 | neutral | None | None | None | None | N |
S/H | 0.2574 | likely_benign | 0.274 | benign | -1.585 | Destabilizing | 0.992 | D | 0.527 | neutral | None | None | None | None | N |
S/I | 0.1906 | likely_benign | 0.1791 | benign | 0.237 | Stabilizing | 0.005 | N | 0.417 | neutral | None | None | None | None | N |
S/K | 0.5579 | ambiguous | 0.5832 | pathogenic | -0.129 | Destabilizing | 0.617 | D | 0.398 | neutral | None | None | None | None | N |
S/L | 0.1102 | likely_benign | 0.0981 | benign | 0.237 | Stabilizing | 0.002 | N | 0.359 | neutral | N | 0.472617141 | None | None | N |
S/M | 0.1922 | likely_benign | 0.1772 | benign | 0.216 | Stabilizing | 0.85 | D | 0.532 | neutral | None | None | None | None | N |
S/N | 0.1812 | likely_benign | 0.1667 | benign | -0.8 | Destabilizing | 0.766 | D | 0.488 | neutral | None | None | None | None | N |
S/P | 0.9713 | likely_pathogenic | 0.97 | pathogenic | -0.062 | Destabilizing | 0.896 | D | 0.548 | neutral | D | 0.542187005 | None | None | N |
S/Q | 0.3694 | ambiguous | 0.3901 | ambiguous | -0.58 | Destabilizing | 0.92 | D | 0.518 | neutral | None | None | None | None | N |
S/R | 0.4738 | ambiguous | 0.5024 | ambiguous | -0.523 | Destabilizing | 0.85 | D | 0.549 | neutral | None | None | None | None | N |
S/T | 0.0801 | likely_benign | 0.0773 | benign | -0.501 | Destabilizing | 0.334 | N | 0.394 | neutral | N | 0.493183286 | None | None | N |
S/V | 0.1827 | likely_benign | 0.177 | benign | -0.062 | Destabilizing | 0.103 | N | 0.453 | neutral | None | None | None | None | N |
S/W | 0.3801 | ambiguous | 0.3801 | ambiguous | -0.952 | Destabilizing | 0.992 | D | 0.647 | neutral | None | None | None | None | N |
S/Y | 0.1911 | likely_benign | 0.1832 | benign | -0.495 | Destabilizing | 0.92 | D | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.