Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21591 | 64996;64997;64998 | chr2:178584870;178584869;178584868 | chr2:179449597;179449596;179449595 |
N2AB | 19950 | 60073;60074;60075 | chr2:178584870;178584869;178584868 | chr2:179449597;179449596;179449595 |
N2A | 19023 | 57292;57293;57294 | chr2:178584870;178584869;178584868 | chr2:179449597;179449596;179449595 |
N2B | 12526 | 37801;37802;37803 | chr2:178584870;178584869;178584868 | chr2:179449597;179449596;179449595 |
Novex-1 | 12651 | 38176;38177;38178 | chr2:178584870;178584869;178584868 | chr2:179449597;179449596;179449595 |
Novex-2 | 12718 | 38377;38378;38379 | chr2:178584870;178584869;178584868 | chr2:179449597;179449596;179449595 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | None | None | 0.983 | N | 0.717 | 0.303 | 0.422160833541 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1933 | likely_benign | 0.1672 | benign | -0.187 | Destabilizing | 0.633 | D | 0.609 | neutral | None | None | None | None | I |
N/C | 0.2533 | likely_benign | 0.2178 | benign | 0.362 | Stabilizing | 0.989 | D | 0.736 | prob.delet. | None | None | None | None | I |
N/D | 0.2602 | likely_benign | 0.2294 | benign | 0.138 | Stabilizing | 0.722 | D | 0.611 | neutral | N | 0.451773807 | None | None | I |
N/E | 0.5674 | likely_pathogenic | 0.4882 | ambiguous | 0.076 | Stabilizing | 0.633 | D | 0.624 | neutral | None | None | None | None | I |
N/F | 0.6173 | likely_pathogenic | 0.5371 | ambiguous | -0.739 | Destabilizing | 0.961 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/G | 0.2905 | likely_benign | 0.2595 | benign | -0.299 | Destabilizing | 0.011 | N | 0.173 | neutral | None | None | None | None | I |
N/H | 0.1491 | likely_benign | 0.1274 | benign | -0.38 | Destabilizing | 0.949 | D | 0.615 | neutral | N | 0.482790147 | None | None | I |
N/I | 0.2594 | likely_benign | 0.2129 | benign | 0.008 | Stabilizing | 0.901 | D | 0.745 | deleterious | N | 0.489697477 | None | None | I |
N/K | 0.5656 | likely_pathogenic | 0.4748 | ambiguous | 0.217 | Stabilizing | 0.565 | D | 0.613 | neutral | N | 0.44638663 | None | None | I |
N/L | 0.2792 | likely_benign | 0.2317 | benign | 0.008 | Stabilizing | 0.923 | D | 0.664 | neutral | None | None | None | None | I |
N/M | 0.3729 | ambiguous | 0.3162 | benign | 0.299 | Stabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
N/P | 0.3821 | ambiguous | 0.3178 | benign | -0.033 | Destabilizing | 0.961 | D | 0.726 | prob.delet. | None | None | None | None | I |
N/Q | 0.4388 | ambiguous | 0.364 | ambiguous | -0.173 | Destabilizing | 0.923 | D | 0.627 | neutral | None | None | None | None | I |
N/R | 0.5741 | likely_pathogenic | 0.504 | ambiguous | 0.275 | Stabilizing | 0.923 | D | 0.615 | neutral | None | None | None | None | I |
N/S | 0.081 | likely_benign | 0.0779 | benign | 0.071 | Stabilizing | 0.008 | N | 0.3 | neutral | N | 0.427339509 | None | None | I |
N/T | 0.144 | likely_benign | 0.1267 | benign | 0.131 | Stabilizing | 0.565 | D | 0.613 | neutral | N | 0.460374648 | None | None | I |
N/V | 0.2139 | likely_benign | 0.1867 | benign | -0.033 | Destabilizing | 0.923 | D | 0.724 | prob.delet. | None | None | None | None | I |
N/W | 0.8416 | likely_pathogenic | 0.8045 | pathogenic | -0.813 | Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | I |
N/Y | 0.2615 | likely_benign | 0.2199 | benign | -0.505 | Destabilizing | 0.983 | D | 0.717 | prob.delet. | N | 0.493911218 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.