Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21598 | 65017;65018;65019 | chr2:178584849;178584848;178584847 | chr2:179449576;179449575;179449574 |
N2AB | 19957 | 60094;60095;60096 | chr2:178584849;178584848;178584847 | chr2:179449576;179449575;179449574 |
N2A | 19030 | 57313;57314;57315 | chr2:178584849;178584848;178584847 | chr2:179449576;179449575;179449574 |
N2B | 12533 | 37822;37823;37824 | chr2:178584849;178584848;178584847 | chr2:179449576;179449575;179449574 |
Novex-1 | 12658 | 38197;38198;38199 | chr2:178584849;178584848;178584847 | chr2:179449576;179449575;179449574 |
Novex-2 | 12725 | 38398;38399;38400 | chr2:178584849;178584848;178584847 | chr2:179449576;179449575;179449574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1310732379 | -2.663 | 0.025 | D | 0.523 | 0.383 | 0.380223377699 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
E/G | rs1310732379 | -2.663 | 0.025 | D | 0.523 | 0.383 | 0.380223377699 | gnomAD-4.0.0 | 1.59205E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8826E-05 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.892 | D | 0.684 | 0.411 | 0.411531665326 | gnomAD-4.0.0 | 1.59205E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77562E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9406 | likely_pathogenic | 0.9611 | pathogenic | -2.348 | Highly Destabilizing | 0.805 | D | 0.643 | neutral | D | 0.528772649 | None | None | N |
E/C | 0.9943 | likely_pathogenic | 0.9957 | pathogenic | -1.267 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
E/D | 0.8557 | likely_pathogenic | 0.8549 | pathogenic | -1.751 | Destabilizing | 0.892 | D | 0.636 | neutral | N | 0.497590569 | None | None | N |
E/F | 0.9976 | likely_pathogenic | 0.9982 | pathogenic | -2.065 | Highly Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
E/G | 0.9492 | likely_pathogenic | 0.9635 | pathogenic | -2.705 | Highly Destabilizing | 0.025 | N | 0.523 | neutral | D | 0.530547076 | None | None | N |
E/H | 0.9862 | likely_pathogenic | 0.9896 | pathogenic | -1.791 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
E/I | 0.9855 | likely_pathogenic | 0.992 | pathogenic | -1.303 | Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
E/K | 0.943 | likely_pathogenic | 0.9664 | pathogenic | -2.046 | Highly Destabilizing | 0.892 | D | 0.684 | prob.neutral | D | 0.523884351 | None | None | N |
E/L | 0.9763 | likely_pathogenic | 0.9853 | pathogenic | -1.303 | Destabilizing | 0.987 | D | 0.779 | deleterious | None | None | None | None | N |
E/M | 0.9738 | likely_pathogenic | 0.9841 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
E/N | 0.984 | likely_pathogenic | 0.9873 | pathogenic | -2.096 | Highly Destabilizing | 0.975 | D | 0.793 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9999 | pathogenic | -1.642 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
E/Q | 0.6336 | likely_pathogenic | 0.7075 | pathogenic | -1.852 | Destabilizing | 0.994 | D | 0.775 | deleterious | N | 0.513843773 | None | None | N |
E/R | 0.9657 | likely_pathogenic | 0.977 | pathogenic | -1.757 | Destabilizing | 0.987 | D | 0.81 | deleterious | None | None | None | None | N |
E/S | 0.937 | likely_pathogenic | 0.9524 | pathogenic | -2.846 | Highly Destabilizing | 0.916 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/T | 0.9707 | likely_pathogenic | 0.9797 | pathogenic | -2.499 | Highly Destabilizing | 0.987 | D | 0.749 | deleterious | None | None | None | None | N |
E/V | 0.9576 | likely_pathogenic | 0.9747 | pathogenic | -1.642 | Destabilizing | 0.983 | D | 0.753 | deleterious | D | 0.522949752 | None | None | N |
E/W | 0.9982 | likely_pathogenic | 0.9988 | pathogenic | -2.045 | Highly Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.9948 | likely_pathogenic | 0.9963 | pathogenic | -1.874 | Destabilizing | 0.996 | D | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.