Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21600 | 65023;65024;65025 | chr2:178584843;178584842;178584841 | chr2:179449570;179449569;179449568 |
N2AB | 19959 | 60100;60101;60102 | chr2:178584843;178584842;178584841 | chr2:179449570;179449569;179449568 |
N2A | 19032 | 57319;57320;57321 | chr2:178584843;178584842;178584841 | chr2:179449570;179449569;179449568 |
N2B | 12535 | 37828;37829;37830 | chr2:178584843;178584842;178584841 | chr2:179449570;179449569;179449568 |
Novex-1 | 12660 | 38203;38204;38205 | chr2:178584843;178584842;178584841 | chr2:179449570;179449569;179449568 |
Novex-2 | 12727 | 38404;38405;38406 | chr2:178584843;178584842;178584841 | chr2:179449570;179449569;179449568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1436243584 | -1.038 | 0.99 | N | 0.795 | 0.42 | 0.726150275566 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
C/R | rs1436243584 | -1.038 | 0.99 | N | 0.795 | 0.42 | 0.726150275566 | gnomAD-4.0.0 | 1.36869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 0 | 1.1595E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5873 | likely_pathogenic | 0.6198 | pathogenic | -1.345 | Destabilizing | 0.717 | D | 0.551 | neutral | None | None | None | None | N |
C/D | 0.9572 | likely_pathogenic | 0.9655 | pathogenic | -1.319 | Destabilizing | 0.993 | D | 0.792 | deleterious | None | None | None | None | N |
C/E | 0.9384 | likely_pathogenic | 0.9421 | pathogenic | -1.074 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
C/F | 0.4905 | ambiguous | 0.5317 | ambiguous | -0.87 | Destabilizing | 0.032 | N | 0.518 | neutral | N | 0.481365995 | None | None | N |
C/G | 0.3878 | ambiguous | 0.4206 | ambiguous | -1.684 | Destabilizing | 0.97 | D | 0.761 | deleterious | N | 0.473557604 | None | None | N |
C/H | 0.6891 | likely_pathogenic | 0.7168 | pathogenic | -2.0 | Highly Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
C/I | 0.8185 | likely_pathogenic | 0.8351 | pathogenic | -0.423 | Destabilizing | 0.915 | D | 0.691 | prob.neutral | None | None | None | None | N |
C/K | 0.8063 | likely_pathogenic | 0.8275 | pathogenic | -0.687 | Destabilizing | 0.978 | D | 0.789 | deleterious | None | None | None | None | N |
C/L | 0.6663 | likely_pathogenic | 0.7118 | pathogenic | -0.423 | Destabilizing | 0.754 | D | 0.605 | neutral | None | None | None | None | N |
C/M | 0.6876 | likely_pathogenic | 0.7305 | pathogenic | 0.082 | Stabilizing | 0.994 | D | 0.682 | prob.neutral | None | None | None | None | N |
C/N | 0.7585 | likely_pathogenic | 0.7716 | pathogenic | -1.331 | Destabilizing | 0.993 | D | 0.797 | deleterious | None | None | None | None | N |
C/P | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -0.71 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
C/Q | 0.6341 | likely_pathogenic | 0.6525 | pathogenic | -0.801 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | None | None | N |
C/R | 0.4184 | ambiguous | 0.4529 | ambiguous | -1.301 | Destabilizing | 0.99 | D | 0.795 | deleterious | N | 0.365288186 | None | None | N |
C/S | 0.524 | ambiguous | 0.5462 | ambiguous | -1.55 | Destabilizing | 0.904 | D | 0.655 | neutral | N | 0.442479533 | None | None | N |
C/T | 0.7198 | likely_pathogenic | 0.7505 | pathogenic | -1.13 | Destabilizing | 0.978 | D | 0.687 | prob.neutral | None | None | None | None | N |
C/V | 0.693 | likely_pathogenic | 0.7188 | pathogenic | -0.71 | Destabilizing | 0.86 | D | 0.641 | neutral | None | None | None | None | N |
C/W | 0.7679 | likely_pathogenic | 0.7853 | pathogenic | -1.34 | Destabilizing | 0.997 | D | 0.706 | prob.neutral | N | 0.506357653 | None | None | N |
C/Y | 0.526 | ambiguous | 0.5631 | ambiguous | -1.069 | Destabilizing | 0.89 | D | 0.7 | prob.neutral | N | 0.504992216 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.