Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21603 | 65032;65033;65034 | chr2:178584834;178584833;178584832 | chr2:179449561;179449560;179449559 |
N2AB | 19962 | 60109;60110;60111 | chr2:178584834;178584833;178584832 | chr2:179449561;179449560;179449559 |
N2A | 19035 | 57328;57329;57330 | chr2:178584834;178584833;178584832 | chr2:179449561;179449560;179449559 |
N2B | 12538 | 37837;37838;37839 | chr2:178584834;178584833;178584832 | chr2:179449561;179449560;179449559 |
Novex-1 | 12663 | 38212;38213;38214 | chr2:178584834;178584833;178584832 | chr2:179449561;179449560;179449559 |
Novex-2 | 12730 | 38413;38414;38415 | chr2:178584834;178584833;178584832 | chr2:179449561;179449560;179449559 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.999 | N | 0.449 | 0.392 | 0.490631539035 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0835 | likely_benign | 0.0847 | benign | -0.231 | Destabilizing | 0.702 | D | 0.341 | neutral | None | None | None | None | N |
S/C | 0.1474 | likely_benign | 0.1442 | benign | -0.318 | Destabilizing | 0.999 | D | 0.449 | neutral | N | 0.492893308 | None | None | N |
S/D | 0.3621 | ambiguous | 0.493 | ambiguous | -0.014 | Destabilizing | 0.959 | D | 0.253 | neutral | None | None | None | None | N |
S/E | 0.3996 | ambiguous | 0.5301 | ambiguous | -0.126 | Destabilizing | 0.959 | D | 0.25 | neutral | None | None | None | None | N |
S/F | 0.2365 | likely_benign | 0.2646 | benign | -0.941 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | N |
S/G | 0.1046 | likely_benign | 0.1103 | benign | -0.287 | Destabilizing | 0.026 | N | 0.283 | neutral | N | 0.433590691 | None | None | N |
S/H | 0.3025 | likely_benign | 0.3923 | ambiguous | -0.671 | Destabilizing | 0.999 | D | 0.406 | neutral | None | None | None | None | N |
S/I | 0.1898 | likely_benign | 0.2122 | benign | -0.217 | Destabilizing | 0.968 | D | 0.548 | neutral | N | 0.477498078 | None | None | N |
S/K | 0.5085 | ambiguous | 0.6742 | pathogenic | -0.422 | Destabilizing | 0.919 | D | 0.25 | neutral | None | None | None | None | N |
S/L | 0.1067 | likely_benign | 0.1073 | benign | -0.217 | Destabilizing | 0.919 | D | 0.404 | neutral | None | None | None | None | N |
S/M | 0.2151 | likely_benign | 0.2177 | benign | -0.056 | Destabilizing | 0.999 | D | 0.412 | neutral | None | None | None | None | N |
S/N | 0.15 | likely_benign | 0.1703 | benign | -0.162 | Destabilizing | 0.896 | D | 0.316 | neutral | N | 0.468241982 | None | None | N |
S/P | 0.4065 | ambiguous | 0.4422 | ambiguous | -0.197 | Destabilizing | 0.996 | D | 0.37 | neutral | None | None | None | None | N |
S/Q | 0.3763 | ambiguous | 0.4741 | ambiguous | -0.425 | Destabilizing | 0.996 | D | 0.293 | neutral | None | None | None | None | N |
S/R | 0.4375 | ambiguous | 0.609 | pathogenic | -0.15 | Destabilizing | 0.984 | D | 0.366 | neutral | N | 0.451544521 | None | None | N |
S/T | 0.0778 | likely_benign | 0.0793 | benign | -0.279 | Destabilizing | 0.103 | N | 0.283 | neutral | N | 0.449832367 | None | None | N |
S/V | 0.1912 | likely_benign | 0.199 | benign | -0.197 | Destabilizing | 0.976 | D | 0.447 | neutral | None | None | None | None | N |
S/W | 0.3698 | ambiguous | 0.4372 | ambiguous | -0.992 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
S/Y | 0.2257 | likely_benign | 0.2684 | benign | -0.693 | Destabilizing | 0.996 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.