Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21605 | 65038;65039;65040 | chr2:178584828;178584827;178584826 | chr2:179449555;179449554;179449553 |
N2AB | 19964 | 60115;60116;60117 | chr2:178584828;178584827;178584826 | chr2:179449555;179449554;179449553 |
N2A | 19037 | 57334;57335;57336 | chr2:178584828;178584827;178584826 | chr2:179449555;179449554;179449553 |
N2B | 12540 | 37843;37844;37845 | chr2:178584828;178584827;178584826 | chr2:179449555;179449554;179449553 |
Novex-1 | 12665 | 38218;38219;38220 | chr2:178584828;178584827;178584826 | chr2:179449555;179449554;179449553 |
Novex-2 | 12732 | 38419;38420;38421 | chr2:178584828;178584827;178584826 | chr2:179449555;179449554;179449553 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1553632971 | None | 1.0 | N | 0.631 | 0.459 | 0.29527378943 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3576 | ambiguous | 0.3614 | ambiguous | -0.585 | Destabilizing | 1.0 | D | 0.541 | neutral | N | 0.511691689 | None | None | N |
G/C | 0.4967 | ambiguous | 0.4926 | ambiguous | -0.768 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.501455364 | None | None | N |
G/D | 0.4533 | ambiguous | 0.4862 | ambiguous | -0.718 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.457897277 | None | None | N |
G/E | 0.4608 | ambiguous | 0.4895 | ambiguous | -0.873 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/F | 0.8932 | likely_pathogenic | 0.8947 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/H | 0.6807 | likely_pathogenic | 0.6992 | pathogenic | -0.958 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
G/I | 0.7743 | likely_pathogenic | 0.787 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
G/K | 0.5923 | likely_pathogenic | 0.6185 | pathogenic | -0.937 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/L | 0.7637 | likely_pathogenic | 0.7709 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
G/M | 0.7593 | likely_pathogenic | 0.7733 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/N | 0.466 | ambiguous | 0.4798 | ambiguous | -0.475 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
G/P | 0.9201 | likely_pathogenic | 0.9288 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
G/Q | 0.4996 | ambiguous | 0.5274 | ambiguous | -0.785 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
G/R | 0.5033 | ambiguous | 0.5285 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.472551008 | None | None | N |
G/S | 0.2389 | likely_benign | 0.2423 | benign | -0.652 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.482984935 | None | None | N |
G/T | 0.4496 | ambiguous | 0.4634 | ambiguous | -0.741 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/V | 0.6416 | likely_pathogenic | 0.655 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.50926746 | None | None | N |
G/W | 0.762 | likely_pathogenic | 0.7818 | pathogenic | -1.464 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/Y | 0.7643 | likely_pathogenic | 0.7791 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.