Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21608 | 65047;65048;65049 | chr2:178584819;178584818;178584817 | chr2:179449546;179449545;179449544 |
N2AB | 19967 | 60124;60125;60126 | chr2:178584819;178584818;178584817 | chr2:179449546;179449545;179449544 |
N2A | 19040 | 57343;57344;57345 | chr2:178584819;178584818;178584817 | chr2:179449546;179449545;179449544 |
N2B | 12543 | 37852;37853;37854 | chr2:178584819;178584818;178584817 | chr2:179449546;179449545;179449544 |
Novex-1 | 12668 | 38227;38228;38229 | chr2:178584819;178584818;178584817 | chr2:179449546;179449545;179449544 |
Novex-2 | 12735 | 38428;38429;38430 | chr2:178584819;178584818;178584817 | chr2:179449546;179449545;179449544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.014 | N | 0.254 | 0.132 | 0.498323335527 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2097 | likely_benign | 0.2466 | benign | -1.025 | Destabilizing | 0.822 | D | 0.489 | neutral | N | 0.508109879 | None | None | N |
V/C | 0.6603 | likely_pathogenic | 0.6818 | pathogenic | -0.674 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/D | 0.4035 | ambiguous | 0.541 | ambiguous | -0.698 | Destabilizing | 0.99 | D | 0.771 | deleterious | N | 0.491025629 | None | None | N |
V/E | 0.2659 | likely_benign | 0.3673 | ambiguous | -0.789 | Destabilizing | 0.993 | D | 0.724 | prob.delet. | None | None | None | None | N |
V/F | 0.169 | likely_benign | 0.194 | benign | -1.065 | Destabilizing | 0.942 | D | 0.723 | prob.delet. | N | 0.493527216 | None | None | N |
V/G | 0.2467 | likely_benign | 0.2849 | benign | -1.225 | Destabilizing | 0.971 | D | 0.763 | deleterious | N | 0.475358484 | None | None | N |
V/H | 0.4782 | ambiguous | 0.5609 | ambiguous | -0.731 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
V/I | 0.0724 | likely_benign | 0.0748 | benign | -0.622 | Destabilizing | 0.014 | N | 0.254 | neutral | N | 0.475056099 | None | None | N |
V/K | 0.3243 | likely_benign | 0.436 | ambiguous | -0.784 | Destabilizing | 0.978 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/L | 0.1733 | likely_benign | 0.1885 | benign | -0.622 | Destabilizing | 0.247 | N | 0.406 | neutral | N | 0.494545936 | None | None | N |
V/M | 0.1183 | likely_benign | 0.1326 | benign | -0.418 | Destabilizing | 0.956 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/N | 0.2171 | likely_benign | 0.2653 | benign | -0.457 | Destabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
V/P | 0.9192 | likely_pathogenic | 0.9345 | pathogenic | -0.72 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
V/Q | 0.2462 | likely_benign | 0.3029 | benign | -0.735 | Destabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | N |
V/R | 0.3474 | ambiguous | 0.4405 | ambiguous | -0.183 | Destabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
V/S | 0.2141 | likely_benign | 0.2553 | benign | -0.888 | Destabilizing | 0.978 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/T | 0.18 | likely_benign | 0.2123 | benign | -0.88 | Destabilizing | 0.86 | D | 0.607 | neutral | None | None | None | None | N |
V/W | 0.8072 | likely_pathogenic | 0.8516 | pathogenic | -1.133 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
V/Y | 0.4784 | ambiguous | 0.5461 | ambiguous | -0.86 | Destabilizing | 0.978 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.