Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2161 | 6706;6707;6708 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
N2AB | 2161 | 6706;6707;6708 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
N2A | 2161 | 6706;6707;6708 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
N2B | 2115 | 6568;6569;6570 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
Novex-1 | 2115 | 6568;6569;6570 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
Novex-2 | 2115 | 6568;6569;6570 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
Novex-3 | 2161 | 6706;6707;6708 | chr2:178775383;178775382;178775381 | chr2:179640110;179640109;179640108 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.999 | N | 0.483 | 0.332 | 0.394230963961 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1639 | likely_benign | 0.1718 | benign | -0.461 | Destabilizing | 0.997 | D | 0.45 | neutral | D | 0.63504657 | None | None | I |
S/C | 0.4078 | ambiguous | 0.4246 | ambiguous | -0.371 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.648974604 | None | None | I |
S/D | 0.9315 | likely_pathogenic | 0.9562 | pathogenic | 0.038 | Stabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | I |
S/E | 0.9361 | likely_pathogenic | 0.9544 | pathogenic | 0.015 | Stabilizing | 0.999 | D | 0.55 | neutral | None | None | None | None | I |
S/F | 0.6849 | likely_pathogenic | 0.7691 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.587901607 | None | None | I |
S/G | 0.3143 | likely_benign | 0.3426 | ambiguous | -0.688 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | I |
S/H | 0.7904 | likely_pathogenic | 0.8542 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
S/I | 0.6453 | likely_pathogenic | 0.7091 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
S/K | 0.982 | likely_pathogenic | 0.9865 | pathogenic | -0.655 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | I |
S/L | 0.4556 | ambiguous | 0.5298 | ambiguous | 0.025 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
S/M | 0.5842 | likely_pathogenic | 0.6318 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
S/N | 0.5464 | ambiguous | 0.6308 | pathogenic | -0.509 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | I |
S/P | 0.9801 | likely_pathogenic | 0.9852 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.699150584 | None | None | I |
S/Q | 0.8767 | likely_pathogenic | 0.9053 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
S/R | 0.9578 | likely_pathogenic | 0.971 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
S/T | 0.2053 | likely_benign | 0.2297 | benign | -0.527 | Destabilizing | 0.999 | D | 0.483 | neutral | N | 0.503373636 | None | None | I |
S/V | 0.5524 | ambiguous | 0.6253 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
S/W | 0.8481 | likely_pathogenic | 0.9026 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
S/Y | 0.6485 | likely_pathogenic | 0.746 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.597122429 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.