Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21614 | 65065;65066;65067 | chr2:178584801;178584800;178584799 | chr2:179449528;179449527;179449526 |
N2AB | 19973 | 60142;60143;60144 | chr2:178584801;178584800;178584799 | chr2:179449528;179449527;179449526 |
N2A | 19046 | 57361;57362;57363 | chr2:178584801;178584800;178584799 | chr2:179449528;179449527;179449526 |
N2B | 12549 | 37870;37871;37872 | chr2:178584801;178584800;178584799 | chr2:179449528;179449527;179449526 |
Novex-1 | 12674 | 38245;38246;38247 | chr2:178584801;178584800;178584799 | chr2:179449528;179449527;179449526 |
Novex-2 | 12741 | 38446;38447;38448 | chr2:178584801;178584800;178584799 | chr2:179449528;179449527;179449526 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1255799944 | -1.624 | 0.998 | N | 0.677 | 0.368 | 0.691676124756 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/F | rs1255799944 | -1.624 | 0.998 | N | 0.677 | 0.368 | 0.691676124756 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | N | None | 0 | 2.23654E-05 | None | 0 | 0 | None | 0 | 0 | 8.99622E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3764 | ambiguous | 0.4624 | ambiguous | -1.743 | Destabilizing | 0.91 | D | 0.58 | neutral | N | 0.473162302 | None | None | N |
V/C | 0.7991 | likely_pathogenic | 0.7883 | pathogenic | -1.333 | Destabilizing | 0.092 | N | 0.395 | neutral | None | None | None | None | N |
V/D | 0.9553 | likely_pathogenic | 0.9686 | pathogenic | -1.636 | Destabilizing | 0.998 | D | 0.742 | deleterious | N | 0.485470114 | None | None | N |
V/E | 0.9084 | likely_pathogenic | 0.9311 | pathogenic | -1.466 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/F | 0.6934 | likely_pathogenic | 0.7243 | pathogenic | -1.041 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.485674378 | None | None | N |
V/G | 0.6228 | likely_pathogenic | 0.6857 | pathogenic | -2.244 | Highly Destabilizing | 0.994 | D | 0.725 | prob.delet. | N | 0.518822731 | None | None | N |
V/H | 0.9639 | likely_pathogenic | 0.9697 | pathogenic | -1.895 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
V/I | 0.1188 | likely_benign | 0.1285 | benign | -0.383 | Destabilizing | 0.954 | D | 0.616 | neutral | N | 0.474093306 | None | None | N |
V/K | 0.939 | likely_pathogenic | 0.9494 | pathogenic | -1.262 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
V/L | 0.5531 | ambiguous | 0.5938 | pathogenic | -0.383 | Destabilizing | 0.91 | D | 0.593 | neutral | N | 0.499180965 | None | None | N |
V/M | 0.3965 | ambiguous | 0.4707 | ambiguous | -0.459 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
V/N | 0.7677 | likely_pathogenic | 0.8056 | pathogenic | -1.404 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
V/P | 0.9549 | likely_pathogenic | 0.9616 | pathogenic | -0.805 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/Q | 0.8569 | likely_pathogenic | 0.8813 | pathogenic | -1.307 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/R | 0.9244 | likely_pathogenic | 0.9325 | pathogenic | -1.104 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
V/S | 0.5355 | ambiguous | 0.5922 | pathogenic | -2.12 | Highly Destabilizing | 0.985 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/T | 0.4497 | ambiguous | 0.5264 | ambiguous | -1.801 | Destabilizing | 0.985 | D | 0.632 | neutral | None | None | None | None | N |
V/W | 0.9922 | likely_pathogenic | 0.9932 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
V/Y | 0.9532 | likely_pathogenic | 0.9557 | pathogenic | -1.038 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.