Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21615 | 65068;65069;65070 | chr2:178584798;178584797;178584796 | chr2:179449525;179449524;179449523 |
N2AB | 19974 | 60145;60146;60147 | chr2:178584798;178584797;178584796 | chr2:179449525;179449524;179449523 |
N2A | 19047 | 57364;57365;57366 | chr2:178584798;178584797;178584796 | chr2:179449525;179449524;179449523 |
N2B | 12550 | 37873;37874;37875 | chr2:178584798;178584797;178584796 | chr2:179449525;179449524;179449523 |
Novex-1 | 12675 | 38248;38249;38250 | chr2:178584798;178584797;178584796 | chr2:179449525;179449524;179449523 |
Novex-2 | 12742 | 38449;38450;38451 | chr2:178584798;178584797;178584796 | chr2:179449525;179449524;179449523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.647 | 0.428 | 0.461934685604 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1153 | likely_benign | 0.1283 | benign | -0.491 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.431345394 | None | None | I |
T/C | 0.5684 | likely_pathogenic | 0.5413 | ambiguous | -0.385 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | I |
T/D | 0.7934 | likely_pathogenic | 0.8255 | pathogenic | 0.314 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
T/E | 0.6792 | likely_pathogenic | 0.7223 | pathogenic | 0.255 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
T/F | 0.5672 | likely_pathogenic | 0.5819 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
T/G | 0.2698 | likely_benign | 0.2604 | benign | -0.642 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
T/H | 0.51 | ambiguous | 0.5351 | ambiguous | -0.859 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | I |
T/I | 0.4215 | ambiguous | 0.4328 | ambiguous | -0.207 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.470589225 | None | None | I |
T/K | 0.466 | ambiguous | 0.5117 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.43159611 | None | None | I |
T/L | 0.191 | likely_benign | 0.2025 | benign | -0.207 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
T/M | 0.1467 | likely_benign | 0.1616 | benign | -0.11 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | I |
T/N | 0.2225 | likely_benign | 0.2309 | benign | -0.245 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
T/P | 0.151 | likely_benign | 0.1616 | benign | -0.272 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.466284687 | None | None | I |
T/Q | 0.3541 | ambiguous | 0.3747 | ambiguous | -0.431 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
T/R | 0.4551 | ambiguous | 0.5079 | ambiguous | -0.133 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.464996607 | None | None | I |
T/S | 0.1525 | likely_benign | 0.1612 | benign | -0.501 | Destabilizing | 0.999 | D | 0.512 | neutral | N | 0.42951581 | None | None | I |
T/V | 0.2762 | likely_benign | 0.2861 | benign | -0.272 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | I |
T/W | 0.8231 | likely_pathogenic | 0.832 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
T/Y | 0.6113 | likely_pathogenic | 0.6137 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.