Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21616 | 65071;65072;65073 | chr2:178584795;178584794;178584793 | chr2:179449522;179449521;179449520 |
N2AB | 19975 | 60148;60149;60150 | chr2:178584795;178584794;178584793 | chr2:179449522;179449521;179449520 |
N2A | 19048 | 57367;57368;57369 | chr2:178584795;178584794;178584793 | chr2:179449522;179449521;179449520 |
N2B | 12551 | 37876;37877;37878 | chr2:178584795;178584794;178584793 | chr2:179449522;179449521;179449520 |
Novex-1 | 12676 | 38251;38252;38253 | chr2:178584795;178584794;178584793 | chr2:179449522;179449521;179449520 |
Novex-2 | 12743 | 38452;38453;38454 | chr2:178584795;178584794;178584793 | chr2:179449522;179449521;179449520 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs761445537 | 0.39 | 0.999 | N | 0.557 | 0.391 | 0.268660756437 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 8.91E-06 | 0 |
K/E | rs761445537 | 0.39 | 0.999 | N | 0.557 | 0.391 | 0.268660756437 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs761445537 | 0.39 | 0.999 | N | 0.557 | 0.391 | 0.268660756437 | gnomAD-4.0.0 | 8.97105E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.56858E-05 | 0 | 1.19715E-05 | 0 | 2.8456E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7391 | likely_pathogenic | 0.7095 | pathogenic | 0.039 | Stabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
K/C | 0.9025 | likely_pathogenic | 0.8893 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
K/D | 0.8958 | likely_pathogenic | 0.8707 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
K/E | 0.674 | likely_pathogenic | 0.6158 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.557 | neutral | N | 0.457832988 | None | None | I |
K/F | 0.9754 | likely_pathogenic | 0.9679 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
K/G | 0.718 | likely_pathogenic | 0.6744 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
K/H | 0.5965 | likely_pathogenic | 0.5625 | ambiguous | -0.293 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
K/I | 0.8911 | likely_pathogenic | 0.8752 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.668 | neutral | D | 0.523695407 | None | None | I |
K/L | 0.8233 | likely_pathogenic | 0.8073 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
K/M | 0.7448 | likely_pathogenic | 0.7164 | pathogenic | 0.07 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | I |
K/N | 0.8263 | likely_pathogenic | 0.7916 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.663 | neutral | N | 0.496759522 | None | None | I |
K/P | 0.9577 | likely_pathogenic | 0.95 | pathogenic | 0.342 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
K/Q | 0.3529 | ambiguous | 0.3306 | benign | -0.021 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.481982071 | None | None | I |
K/R | 0.0866 | likely_benign | 0.0851 | benign | -0.037 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.407985744 | None | None | I |
K/S | 0.7743 | likely_pathogenic | 0.7501 | pathogenic | -0.361 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
K/T | 0.584 | likely_pathogenic | 0.5503 | ambiguous | -0.197 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.473301086 | None | None | I |
K/V | 0.8018 | likely_pathogenic | 0.788 | pathogenic | 0.342 | Stabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | I |
K/W | 0.9582 | likely_pathogenic | 0.9507 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/Y | 0.9212 | likely_pathogenic | 0.9021 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.