Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21621 | 65086;65087;65088 | chr2:178584780;178584779;178584778 | chr2:179449507;179449506;179449505 |
N2AB | 19980 | 60163;60164;60165 | chr2:178584780;178584779;178584778 | chr2:179449507;179449506;179449505 |
N2A | 19053 | 57382;57383;57384 | chr2:178584780;178584779;178584778 | chr2:179449507;179449506;179449505 |
N2B | 12556 | 37891;37892;37893 | chr2:178584780;178584779;178584778 | chr2:179449507;179449506;179449505 |
Novex-1 | 12681 | 38266;38267;38268 | chr2:178584780;178584779;178584778 | chr2:179449507;179449506;179449505 |
Novex-2 | 12748 | 38467;38468;38469 | chr2:178584780;178584779;178584778 | chr2:179449507;179449506;179449505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.052 | N | 0.68 | 0.366 | 0.470318359215 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
V/F | None | None | 0.317 | N | 0.833 | 0.293 | 0.391000631824 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4749 | ambiguous | 0.4907 | ambiguous | -1.9 | Destabilizing | 0.052 | N | 0.68 | prob.neutral | N | 0.481290875 | None | None | N |
V/C | 0.9052 | likely_pathogenic | 0.8915 | pathogenic | -1.546 | Destabilizing | 0.935 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9859 | likely_pathogenic | 0.9857 | pathogenic | -1.792 | Destabilizing | 0.484 | N | 0.853 | deleterious | N | 0.505155575 | None | None | N |
V/E | 0.9577 | likely_pathogenic | 0.9568 | pathogenic | -1.635 | Destabilizing | 0.555 | D | 0.821 | deleterious | None | None | None | None | N |
V/F | 0.4932 | ambiguous | 0.4595 | ambiguous | -1.173 | Destabilizing | 0.317 | N | 0.833 | deleterious | N | 0.504253294 | None | None | N |
V/G | 0.8194 | likely_pathogenic | 0.8154 | pathogenic | -2.385 | Highly Destabilizing | 0.484 | N | 0.828 | deleterious | D | 0.552493354 | None | None | N |
V/H | 0.9823 | likely_pathogenic | 0.9812 | pathogenic | -1.88 | Destabilizing | 0.935 | D | 0.839 | deleterious | None | None | None | None | N |
V/I | 0.0727 | likely_benign | 0.0686 | benign | -0.591 | Destabilizing | None | N | 0.254 | neutral | N | 0.49329793 | None | None | N |
V/K | 0.9716 | likely_pathogenic | 0.9711 | pathogenic | -1.629 | Destabilizing | 0.555 | D | 0.828 | deleterious | None | None | None | None | N |
V/L | 0.2718 | likely_benign | 0.2512 | benign | -0.591 | Destabilizing | None | N | 0.343 | neutral | N | 0.520268313 | None | None | N |
V/M | 0.3167 | likely_benign | 0.3025 | benign | -0.632 | Destabilizing | 0.007 | N | 0.502 | neutral | None | None | None | None | N |
V/N | 0.9549 | likely_pathogenic | 0.9521 | pathogenic | -1.748 | Destabilizing | 0.791 | D | 0.853 | deleterious | None | None | None | None | N |
V/P | 0.9268 | likely_pathogenic | 0.9255 | pathogenic | -0.996 | Destabilizing | 0.791 | D | 0.837 | deleterious | None | None | None | None | N |
V/Q | 0.9517 | likely_pathogenic | 0.9522 | pathogenic | -1.67 | Destabilizing | 0.555 | D | 0.836 | deleterious | None | None | None | None | N |
V/R | 0.9517 | likely_pathogenic | 0.9533 | pathogenic | -1.354 | Destabilizing | 0.555 | D | 0.849 | deleterious | None | None | None | None | N |
V/S | 0.8338 | likely_pathogenic | 0.841 | pathogenic | -2.428 | Highly Destabilizing | 0.262 | N | 0.818 | deleterious | None | None | None | None | N |
V/T | 0.5785 | likely_pathogenic | 0.6042 | pathogenic | -2.115 | Highly Destabilizing | 0.149 | N | 0.712 | prob.delet. | None | None | None | None | N |
V/W | 0.972 | likely_pathogenic | 0.9704 | pathogenic | -1.48 | Destabilizing | 0.935 | D | 0.831 | deleterious | None | None | None | None | N |
V/Y | 0.928 | likely_pathogenic | 0.9163 | pathogenic | -1.142 | Destabilizing | 0.555 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.