Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2163 | 6712;6713;6714 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
N2AB | 2163 | 6712;6713;6714 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
N2A | 2163 | 6712;6713;6714 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
N2B | 2117 | 6574;6575;6576 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
Novex-1 | 2117 | 6574;6575;6576 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
Novex-2 | 2117 | 6574;6575;6576 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
Novex-3 | 2163 | 6712;6713;6714 | chr2:178775377;178775376;178775375 | chr2:179640104;179640103;179640102 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs765031763 | 0.756 | 1.0 | N | 0.777 | 0.642 | 0.667488003546 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
H/L | rs765031763 | 0.756 | 1.0 | N | 0.777 | 0.642 | 0.667488003546 | gnomAD-4.0.0 | 4.78868E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29509E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.887 | likely_pathogenic | 0.9134 | pathogenic | -0.485 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
H/C | 0.7771 | likely_pathogenic | 0.7788 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
H/D | 0.9026 | likely_pathogenic | 0.9263 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.483540994 | None | None | I |
H/E | 0.9119 | likely_pathogenic | 0.9357 | pathogenic | -0.079 | Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | I |
H/F | 0.7737 | likely_pathogenic | 0.7944 | pathogenic | 0.538 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
H/G | 0.9275 | likely_pathogenic | 0.9453 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
H/I | 0.9219 | likely_pathogenic | 0.937 | pathogenic | 0.421 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
H/K | 0.8871 | likely_pathogenic | 0.9117 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
H/L | 0.5941 | likely_pathogenic | 0.6347 | pathogenic | 0.421 | Stabilizing | 1.0 | D | 0.777 | deleterious | N | 0.501123153 | None | None | I |
H/M | 0.9098 | likely_pathogenic | 0.9239 | pathogenic | 0.252 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
H/N | 0.4956 | ambiguous | 0.5714 | pathogenic | -0.418 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.468760735 | None | None | I |
H/P | 0.8423 | likely_pathogenic | 0.8672 | pathogenic | 0.142 | Stabilizing | 1.0 | D | 0.807 | deleterious | N | 0.509575668 | None | None | I |
H/Q | 0.7501 | likely_pathogenic | 0.802 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.464832961 | None | None | I |
H/R | 0.683 | likely_pathogenic | 0.7368 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.468534326 | None | None | I |
H/S | 0.7353 | likely_pathogenic | 0.7886 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
H/T | 0.8654 | likely_pathogenic | 0.8991 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
H/V | 0.8782 | likely_pathogenic | 0.903 | pathogenic | 0.142 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
H/W | 0.8494 | likely_pathogenic | 0.8552 | pathogenic | 0.784 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
H/Y | 0.4268 | ambiguous | 0.4587 | ambiguous | 0.923 | Stabilizing | 0.999 | D | 0.559 | neutral | N | 0.499056641 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.