Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21634 | 65125;65126;65127 | chr2:178584741;178584740;178584739 | chr2:179449468;179449467;179449466 |
N2AB | 19993 | 60202;60203;60204 | chr2:178584741;178584740;178584739 | chr2:179449468;179449467;179449466 |
N2A | 19066 | 57421;57422;57423 | chr2:178584741;178584740;178584739 | chr2:179449468;179449467;179449466 |
N2B | 12569 | 37930;37931;37932 | chr2:178584741;178584740;178584739 | chr2:179449468;179449467;179449466 |
Novex-1 | 12694 | 38305;38306;38307 | chr2:178584741;178584740;178584739 | chr2:179449468;179449467;179449466 |
Novex-2 | 12761 | 38506;38507;38508 | chr2:178584741;178584740;178584739 | chr2:179449468;179449467;179449466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1191272248 | None | 0.997 | N | 0.557 | 0.318 | 0.637113853397 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1191272248 | None | 0.997 | N | 0.557 | 0.318 | 0.637113853397 | gnomAD-4.0.0 | 2.56327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.42648E-05 | None | 0 | 0 | 2.39418E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8816 | likely_pathogenic | 0.8865 | pathogenic | -2.723 | Highly Destabilizing | 0.999 | D | 0.637 | neutral | D | 0.556758629 | None | None | N |
V/C | 0.9614 | likely_pathogenic | 0.9619 | pathogenic | -1.854 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/D | 0.9987 | likely_pathogenic | 0.9991 | pathogenic | -3.27 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.63969891 | None | None | N |
V/E | 0.9953 | likely_pathogenic | 0.9965 | pathogenic | -2.974 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/F | 0.9614 | likely_pathogenic | 0.9573 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.574862884 | None | None | N |
V/G | 0.923 | likely_pathogenic | 0.932 | pathogenic | -3.245 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.63969891 | None | None | N |
V/H | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -2.894 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
V/I | 0.1263 | likely_benign | 0.1203 | benign | -1.161 | Destabilizing | 0.997 | D | 0.557 | neutral | N | 0.480326711 | None | None | N |
V/K | 0.9965 | likely_pathogenic | 0.9975 | pathogenic | -2.136 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/L | 0.8034 | likely_pathogenic | 0.789 | pathogenic | -1.161 | Destabilizing | 0.997 | D | 0.661 | neutral | N | 0.517152623 | None | None | N |
V/M | 0.86 | likely_pathogenic | 0.8635 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
V/N | 0.9951 | likely_pathogenic | 0.9963 | pathogenic | -2.811 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/P | 0.9954 | likely_pathogenic | 0.9968 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/Q | 0.9943 | likely_pathogenic | 0.9958 | pathogenic | -2.454 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/R | 0.993 | likely_pathogenic | 0.9948 | pathogenic | -2.206 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/S | 0.9713 | likely_pathogenic | 0.9754 | pathogenic | -3.203 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.9333 | likely_pathogenic | 0.939 | pathogenic | -2.773 | Highly Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
V/W | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
V/Y | 0.9962 | likely_pathogenic | 0.9965 | pathogenic | -1.758 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.