Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21644 | 65155;65156;65157 | chr2:178584711;178584710;178584709 | chr2:179449438;179449437;179449436 |
N2AB | 20003 | 60232;60233;60234 | chr2:178584711;178584710;178584709 | chr2:179449438;179449437;179449436 |
N2A | 19076 | 57451;57452;57453 | chr2:178584711;178584710;178584709 | chr2:179449438;179449437;179449436 |
N2B | 12579 | 37960;37961;37962 | chr2:178584711;178584710;178584709 | chr2:179449438;179449437;179449436 |
Novex-1 | 12704 | 38335;38336;38337 | chr2:178584711;178584710;178584709 | chr2:179449438;179449437;179449436 |
Novex-2 | 12771 | 38536;38537;38538 | chr2:178584711;178584710;178584709 | chr2:179449438;179449437;179449436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.961 | N | 0.602 | 0.265 | 0.294206760003 | gnomAD-4.0.0 | 2.053E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1479 | likely_benign | 0.1633 | benign | -0.674 | Destabilizing | 0.98 | D | 0.597 | neutral | N | 0.52165518 | None | None | I |
E/C | 0.816 | likely_pathogenic | 0.821 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
E/D | 0.0936 | likely_benign | 0.0956 | benign | -0.636 | Destabilizing | 0.135 | N | 0.276 | neutral | N | 0.422416479 | None | None | I |
E/F | 0.7704 | likely_pathogenic | 0.7609 | pathogenic | -0.473 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/G | 0.1852 | likely_benign | 0.1985 | benign | -0.908 | Destabilizing | 0.99 | D | 0.63 | neutral | N | 0.487484803 | None | None | I |
E/H | 0.4519 | ambiguous | 0.4602 | ambiguous | -0.38 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | I |
E/I | 0.3718 | ambiguous | 0.3728 | ambiguous | -0.076 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/K | 0.1394 | likely_benign | 0.1507 | benign | 0.012 | Stabilizing | 0.961 | D | 0.602 | neutral | N | 0.514825208 | None | None | I |
E/L | 0.3554 | ambiguous | 0.3523 | ambiguous | -0.076 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | I |
E/M | 0.4647 | ambiguous | 0.4708 | ambiguous | 0.155 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/N | 0.2265 | likely_benign | 0.2379 | benign | -0.351 | Destabilizing | 0.985 | D | 0.585 | neutral | None | None | None | None | I |
E/P | 0.3077 | likely_benign | 0.3546 | ambiguous | -0.256 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
E/Q | 0.1307 | likely_benign | 0.1365 | benign | -0.315 | Destabilizing | 0.817 | D | 0.301 | neutral | N | 0.504320213 | None | None | I |
E/R | 0.2673 | likely_benign | 0.2793 | benign | 0.251 | Stabilizing | 0.996 | D | 0.566 | neutral | None | None | None | None | I |
E/S | 0.1824 | likely_benign | 0.191 | benign | -0.527 | Destabilizing | 0.971 | D | 0.563 | neutral | None | None | None | None | I |
E/T | 0.2327 | likely_benign | 0.2375 | benign | -0.338 | Destabilizing | 0.671 | D | 0.361 | neutral | None | None | None | None | I |
E/V | 0.2174 | likely_benign | 0.2257 | benign | -0.256 | Destabilizing | 0.994 | D | 0.587 | neutral | N | 0.473383474 | None | None | I |
E/W | 0.906 | likely_pathogenic | 0.9042 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
E/Y | 0.5853 | likely_pathogenic | 0.5846 | pathogenic | -0.223 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.